Hb_006698_020

Information

Type -
Description -
Location Contig6698: 20015-23957
Sequence    

Annotation

kegg
ID pop:POPTR_0004s06420g
description POPTRDRAFT_1075175; FLAGELLIN-SENSITIVE 2 family protein
nr
ID KDP37942.1
description hypothetical protein JCGZ_04585 [Jatropha curcas]
swissprot
ID Q9FL28
description LRR receptor-like serine/threonine-protein kinase FLS2 OS=Arabidopsis thaliana GN=FLS2 PE=1 SV=1
trembl
ID A0A067KP78
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_04585 PE=4 SV=1
Gene Ontology
ID GO:0016021
description lrr receptor-like serine threonine-protein kinase fls2

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_53376: 20215-20594 , PASA_asmbl_53380: 22178-24062
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_006698_020 0.0 - - hypothetical protein JCGZ_04585 [Jatropha curcas]
2 Hb_013720_010 0.0818299305 - - Putative DNA repair RAD23-3 -like protein [Gossypium arboreum]
3 Hb_008667_030 0.0839616832 - - PREDICTED: premnaspirodiene oxygenase-like [Jatropha curcas]
4 Hb_000000_070 0.0973626402 - - allene oxide synthase [Hevea brasiliensis]
5 Hb_029866_050 0.1020261642 transcription factor TF Family: ERF PREDICTED: ethylene-responsive transcription factor CRF4 [Jatropha curcas]
6 Hb_000331_710 0.1041742782 - - BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative [Ricinus communis]
7 Hb_002529_080 0.1065543052 - - PREDICTED: 1-aminocyclopropane-1-carboxylate synthase [Jatropha curcas]
8 Hb_003914_050 0.1078855325 - - PREDICTED: uncharacterized protein LOC104445137 [Eucalyptus grandis]
9 Hb_117127_010 0.1092326033 transcription factor TF Family: bHLH PREDICTED: transcription factor bHLH106 [Jatropha curcas]
10 Hb_001568_120 0.1092929837 - - hypothetical protein JCGZ_05918 [Jatropha curcas]
11 Hb_000027_060 0.1134760105 - - hypothetical protein POPTR_0004s07470g [Populus trichocarpa]
12 Hb_001104_270 0.1135138211 - - hypothetical protein POPTR_0007s13980g [Populus trichocarpa]
13 Hb_000003_420 0.1182549829 - - o-methyltransferase, putative [Ricinus communis]
14 Hb_174380_010 0.1199957303 - - kinase, putative [Ricinus communis]
15 Hb_000649_160 0.1205380767 - - PREDICTED: nudix hydrolase 18, mitochondrial [Jatropha curcas]
16 Hb_000397_090 0.1247892693 - - PREDICTED: uncharacterized protein LOC105641235 [Jatropha curcas]
17 Hb_009683_010 0.1255203039 - - PREDICTED: probable receptor-like protein kinase At1g67000 [Jatropha curcas]
18 Hb_000338_030 0.1258370918 transcription factor TF Family: HB hypothetical protein JCGZ_21254 [Jatropha curcas]
19 Hb_000247_150 0.1314206102 - - PREDICTED: haloacid dehalogenase-like hydrolase domain-containing protein 3 [Jatropha curcas]
20 Hb_000098_250 0.131849708 - - UDP-glucose flavonoid 3-O-glucosyltransferase [Medicago truncatula]

Gene co-expression network

sample Hb_006698_020 Hb_006698_020 Hb_013720_010 Hb_013720_010 Hb_006698_020--Hb_013720_010 Hb_008667_030 Hb_008667_030 Hb_006698_020--Hb_008667_030 Hb_000000_070 Hb_000000_070 Hb_006698_020--Hb_000000_070 Hb_029866_050 Hb_029866_050 Hb_006698_020--Hb_029866_050 Hb_000331_710 Hb_000331_710 Hb_006698_020--Hb_000331_710 Hb_002529_080 Hb_002529_080 Hb_006698_020--Hb_002529_080 Hb_013720_010--Hb_000331_710 Hb_000247_150 Hb_000247_150 Hb_013720_010--Hb_000247_150 Hb_000027_060 Hb_000027_060 Hb_013720_010--Hb_000027_060 Hb_001104_270 Hb_001104_270 Hb_013720_010--Hb_001104_270 Hb_013720_010--Hb_008667_030 Hb_008667_030--Hb_002529_080 Hb_117127_010 Hb_117127_010 Hb_008667_030--Hb_117127_010 Hb_000098_250 Hb_000098_250 Hb_008667_030--Hb_000098_250 Hb_000338_030 Hb_000338_030 Hb_008667_030--Hb_000338_030 Hb_008667_030--Hb_000000_070 Hb_006615_180 Hb_006615_180 Hb_000000_070--Hb_006615_180 Hb_000000_070--Hb_002529_080 Hb_001568_120 Hb_001568_120 Hb_000000_070--Hb_001568_120 Hb_000000_070--Hb_117127_010 Hb_004122_020 Hb_004122_020 Hb_000000_070--Hb_004122_020 Hb_000649_160 Hb_000649_160 Hb_029866_050--Hb_000649_160 Hb_000003_420 Hb_000003_420 Hb_029866_050--Hb_000003_420 Hb_029866_050--Hb_001568_120 Hb_000359_080 Hb_000359_080 Hb_029866_050--Hb_000359_080 Hb_000473_080 Hb_000473_080 Hb_029866_050--Hb_000473_080 Hb_000331_710--Hb_000027_060 Hb_000331_710--Hb_000247_150 Hb_000705_130 Hb_000705_130 Hb_000331_710--Hb_000705_130 Hb_004712_140 Hb_004712_140 Hb_000331_710--Hb_004712_140 Hb_000094_010 Hb_000094_010 Hb_002529_080--Hb_000094_010 Hb_008040_060 Hb_008040_060 Hb_002529_080--Hb_008040_060 Hb_002529_080--Hb_000098_250 Hb_003914_050 Hb_003914_050 Hb_002529_080--Hb_003914_050
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0190445 3.12899 0.871386 0.760273 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.00978037 0 0.434123 0.292866

CAGE analysis