Hb_006711_020

Information

Type -
Description -
Location Contig6711: 3958-7109
Sequence    

Annotation

kegg
ID rcu:RCOM_1052490
description hypothetical protein
nr
ID KDP33687.1
description hypothetical protein JCGZ_07258 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KC16
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_07258 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_53439: 3871-6565 , PASA_asmbl_53440: 6746-7337
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_006711_020 0.0 - - hypothetical protein JCGZ_07258 [Jatropha curcas]
2 Hb_010519_020 0.0773524046 - - hypothetical protein JCGZ_19028 [Jatropha curcas]
3 Hb_005237_040 0.0847718767 - - PREDICTED: uncharacterized protein LOC105630923 [Jatropha curcas]
4 Hb_009785_010 0.0861072252 - - PREDICTED: uncharacterized protein LOC105648749 [Jatropha curcas]
5 Hb_002391_350 0.0862152658 - - PREDICTED: uncharacterized protein LOC105647080 [Jatropha curcas]
6 Hb_002686_390 0.0924924336 - - PREDICTED: uncharacterized protein LOC105647789 [Jatropha curcas]
7 Hb_004884_200 0.0925884221 - - PREDICTED: ferritin-3, chloroplastic [Jatropha curcas]
8 Hb_010926_010 0.0949145652 - - PREDICTED: zinc-metallopeptidase, peroxisomal-like [Jatropha curcas]
9 Hb_000335_050 0.0982376936 - - PREDICTED: CASP-like protein 4A1 isoform X1 [Jatropha curcas]
10 Hb_009627_040 0.1012398735 - - Lipase class 3-related protein, putative [Theobroma cacao]
11 Hb_001421_010 0.1020763272 transcription factor TF Family: ARR-B PREDICTED: two-component response regulator-like APRR2 isoform X1 [Jatropha curcas]
12 Hb_000010_200 0.1024762298 - - BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative [Ricinus communis]
13 Hb_003807_020 0.1033669199 - - PREDICTED: subtilisin-like protease SBT2.5 [Jatropha curcas]
14 Hb_005211_090 0.1057909356 - - PREDICTED: aluminum-activated malate transporter 4-like isoform X1 [Jatropha curcas]
15 Hb_004447_020 0.1063248979 - - carbohydrate binding protein, putative [Ricinus communis]
16 Hb_175758_010 0.1098282493 - - PREDICTED: aspartic proteinase A1-like isoform X2 [Jatropha curcas]
17 Hb_000236_050 0.1115208762 - - phosphate transporter [Manihot esculenta]
18 Hb_000403_110 0.1119298278 transcription factor TF Family: WRKY PREDICTED: probable WRKY transcription factor 51 [Jatropha curcas]
19 Hb_006949_030 0.1121216222 transcription factor TF Family: WRKY WRKY transcription factor, putative [Ricinus communis]
20 Hb_000579_180 0.1133523436 transcription factor TF Family: bZIP PREDICTED: ocs element-binding factor 1-like [Jatropha curcas]

Gene co-expression network

sample Hb_006711_020 Hb_006711_020 Hb_010519_020 Hb_010519_020 Hb_006711_020--Hb_010519_020 Hb_005237_040 Hb_005237_040 Hb_006711_020--Hb_005237_040 Hb_009785_010 Hb_009785_010 Hb_006711_020--Hb_009785_010 Hb_002391_350 Hb_002391_350 Hb_006711_020--Hb_002391_350 Hb_002686_390 Hb_002686_390 Hb_006711_020--Hb_002686_390 Hb_004884_200 Hb_004884_200 Hb_006711_020--Hb_004884_200 Hb_001318_120 Hb_001318_120 Hb_010519_020--Hb_001318_120 Hb_175758_010 Hb_175758_010 Hb_010519_020--Hb_175758_010 Hb_001421_010 Hb_001421_010 Hb_010519_020--Hb_001421_010 Hb_011472_020 Hb_011472_020 Hb_010519_020--Hb_011472_020 Hb_000403_110 Hb_000403_110 Hb_010519_020--Hb_000403_110 Hb_005237_040--Hb_009785_010 Hb_014037_010 Hb_014037_010 Hb_005237_040--Hb_014037_010 Hb_005237_040--Hb_004884_200 Hb_000236_050 Hb_000236_050 Hb_005237_040--Hb_000236_050 Hb_005237_040--Hb_002391_350 Hb_009785_010--Hb_004884_200 Hb_009785_010--Hb_014037_010 Hb_009785_010--Hb_000236_050 Hb_009785_010--Hb_002391_350 Hb_002391_350--Hb_004884_200 Hb_003807_020 Hb_003807_020 Hb_002391_350--Hb_003807_020 Hb_009627_040 Hb_009627_040 Hb_002391_350--Hb_009627_040 Hb_000335_050 Hb_000335_050 Hb_002391_350--Hb_000335_050 Hb_000010_200 Hb_000010_200 Hb_002686_390--Hb_000010_200 Hb_000254_040 Hb_000254_040 Hb_002686_390--Hb_000254_040 Hb_006949_030 Hb_006949_030 Hb_002686_390--Hb_006949_030 Hb_002686_390--Hb_004884_200 Hb_001514_210 Hb_001514_210 Hb_002686_390--Hb_001514_210 Hb_004884_200--Hb_014037_010 Hb_004884_200--Hb_009627_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0384915 4.98906 2.22971 2.66661 0.00770659 0.0351562
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.0412436 0.0786426 10.4702 1.54916

CAGE analysis