Hb_006816_380

Information

Type -
Description -
Location Contig6816: 235936-241711
Sequence    

Annotation

kegg
ID rcu:RCOM_1434220
description kinesin heavy chain, putative
nr
ID XP_012088948.1
description PREDICTED: kinesin-4-like [Jatropha curcas]
swissprot
ID O81635
description Kinesin-4 OS=Arabidopsis thaliana GN=ATK4 PE=1 SV=2
trembl
ID A0A067JV52
description Kinesin-like protein OS=Jatropha curcas GN=JCGZ_23257 PE=3 SV=1
Gene Ontology
ID GO:0005871
description kinesin heavy

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_53837: 235655-236606 , PASA_asmbl_53838: 237127-237286 , PASA_asmbl_53839: 238168-238564 , PASA_asmbl_53840: 238790-239564 , PASA_asmbl_53841: 239594-240270 , PASA_asmbl_53842: 240518-240807
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_006816_380 0.0 - - PREDICTED: kinesin-4-like [Jatropha curcas]
2 Hb_000915_170 0.0617469728 transcription factor TF Family: NAC PREDICTED: NAC domain-containing protein 7 isoform X1 [Vitis vinifera]
3 Hb_012395_240 0.069887444 - - PREDICTED: uncharacterized protein LOC105638421 isoform X2 [Jatropha curcas]
4 Hb_000358_260 0.074856209 - - PREDICTED: lachrymatory-factor synthase-like [Vitis vinifera]
5 Hb_000928_030 0.0820610767 transcription factor TF Family: bZIP PREDICTED: protein ABSCISIC ACID-INSENSITIVE 5 [Jatropha curcas]
6 Hb_052530_020 0.0845101204 - - cytochrome B5 isoform 1, putative [Ricinus communis]
7 Hb_000103_200 0.0870288378 - - calmodulin binding protein, putative [Ricinus communis]
8 Hb_007904_150 0.0914813223 - - PREDICTED: probable pectate lyase 5 [Populus euphratica]
9 Hb_189208_070 0.0918971964 - - 10-deacetylbaccatin III 10-O-acetyltransferase, putative [Ricinus communis]
10 Hb_003723_050 0.0946034979 - - conserved hypothetical protein [Ricinus communis]
11 Hb_000003_500 0.0984463864 transcription factor TF Family: C2C2-GATA PREDICTED: GATA transcription factor 12-like [Jatropha curcas]
12 Hb_000684_070 0.0986117035 - - PREDICTED: uncharacterized protein LOC105642198 isoform X1 [Jatropha curcas]
13 Hb_002740_050 0.1007608194 transcription factor TF Family: MYB PREDICTED: transcription factor MYB86-like [Populus euphratica]
14 Hb_001534_130 0.1013811822 - - PREDICTED: serine carboxypeptidase-like 51 [Jatropha curcas]
15 Hb_126714_010 0.101497018 - - hypothetical protein CISIN_1g041016mg, partial [Citrus sinensis]
16 Hb_000599_150 0.101569317 - - PREDICTED: probable arabinose 5-phosphate isomerase [Jatropha curcas]
17 Hb_005833_010 0.102146275 - - PREDICTED: pentatricopeptide repeat-containing protein At3g46790, chloroplastic [Jatropha curcas]
18 Hb_006588_140 0.1023693281 - - PREDICTED: uncharacterized protein LOC104906772 [Beta vulgaris subsp. vulgaris]
19 Hb_002119_100 0.102393051 - - cytochrome B561, putative [Ricinus communis]
20 Hb_004032_280 0.1034627141 - - PREDICTED: uncharacterized protein LOC105635149 [Jatropha curcas]

Gene co-expression network

sample Hb_006816_380 Hb_006816_380 Hb_000915_170 Hb_000915_170 Hb_006816_380--Hb_000915_170 Hb_012395_240 Hb_012395_240 Hb_006816_380--Hb_012395_240 Hb_000358_260 Hb_000358_260 Hb_006816_380--Hb_000358_260 Hb_000928_030 Hb_000928_030 Hb_006816_380--Hb_000928_030 Hb_052530_020 Hb_052530_020 Hb_006816_380--Hb_052530_020 Hb_000103_200 Hb_000103_200 Hb_006816_380--Hb_000103_200 Hb_000915_170--Hb_000358_260 Hb_007904_150 Hb_007904_150 Hb_000915_170--Hb_007904_150 Hb_001981_050 Hb_001981_050 Hb_000915_170--Hb_001981_050 Hb_002740_050 Hb_002740_050 Hb_000915_170--Hb_002740_050 Hb_185811_010 Hb_185811_010 Hb_000915_170--Hb_185811_010 Hb_004635_120 Hb_004635_120 Hb_012395_240--Hb_004635_120 Hb_000538_090 Hb_000538_090 Hb_012395_240--Hb_000538_090 Hb_012395_240--Hb_000928_030 Hb_000000_390 Hb_000000_390 Hb_012395_240--Hb_000000_390 Hb_189208_070 Hb_189208_070 Hb_012395_240--Hb_189208_070 Hb_010577_020 Hb_010577_020 Hb_000358_260--Hb_010577_020 Hb_005833_010 Hb_005833_010 Hb_000358_260--Hb_005833_010 Hb_056506_040 Hb_056506_040 Hb_000358_260--Hb_056506_040 Hb_000358_260--Hb_000928_030 Hb_000028_190 Hb_000028_190 Hb_000928_030--Hb_000028_190 Hb_004137_040 Hb_004137_040 Hb_000928_030--Hb_004137_040 Hb_000928_030--Hb_052530_020 Hb_002221_060 Hb_002221_060 Hb_000928_030--Hb_002221_060 Hb_000928_030--Hb_000103_200 Hb_052530_020--Hb_004137_040 Hb_000599_150 Hb_000599_150 Hb_052530_020--Hb_000599_150 Hb_002150_090 Hb_002150_090 Hb_052530_020--Hb_002150_090 Hb_052530_020--Hb_000028_190 Hb_052530_020--Hb_000103_200 Hb_000103_200--Hb_004137_040 Hb_000230_300 Hb_000230_300 Hb_000103_200--Hb_000230_300 Hb_000103_200--Hb_002221_060 Hb_005762_010 Hb_005762_010 Hb_000103_200--Hb_005762_010 Hb_000103_200--Hb_000028_190
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0137534 0.124544 3.92471 5.05558 0.011907 0.0382188
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0418192 0.0109696 0.0209969 0.0130497 4.6841

CAGE analysis