Hb_006847_040

Information

Type transcription factor
Description TF Family: HB
Location Contig6847: 50928-54862
Sequence    

Annotation

kegg
ID rcu:RCOM_0418780
description bel1 homeotic protein, putative
nr
ID XP_012074314.1
description PREDICTED: BEL1-like homeodomain protein 1 [Jatropha curcas]
swissprot
ID Q9SJ56
description BEL1-like homeodomain protein 1 OS=Arabidopsis thaliana GN=BLH1 PE=1 SV=1
trembl
ID A0A067KM80
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_08757 PE=4 SV=1
Gene Ontology
ID GO:0003677
description bel1-like homeodomain protein 1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_54087: 50970-54488 , PASA_asmbl_54088: 51027-54492 , PASA_asmbl_54089: 51055-54858 , PASA_asmbl_54090: 50970-55030 , PASA_asmbl_54091: 50970-55478 , PASA_asmbl_54093: 54586-55478
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_006847_040 0.0 transcription factor TF Family: HB PREDICTED: BEL1-like homeodomain protein 1 [Jatropha curcas]
2 Hb_045793_010 0.0678256997 - - PREDICTED: putative disease resistance protein RGA3 [Pyrus x bretschneideri]
3 Hb_001021_170 0.0721416353 - - PREDICTED: uncharacterized protein LOC105642474 [Jatropha curcas]
4 Hb_000025_360 0.074410998 - - PREDICTED: protein SMG7 isoform X1 [Jatropha curcas]
5 Hb_076693_020 0.0776803716 - - hypothetical protein CISIN_1g0121812mg, partial [Citrus sinensis]
6 Hb_000174_220 0.0787962939 - - cohesin subunit rad21, putative [Ricinus communis]
7 Hb_015807_070 0.0807367152 - - PREDICTED: autophagy-related protein 18f [Jatropha curcas]
8 Hb_183963_030 0.0811992959 - - DNA binding protein, putative [Ricinus communis]
9 Hb_000139_090 0.0812915808 - - PREDICTED: protein TIME FOR COFFEE isoform X3 [Jatropha curcas]
10 Hb_001247_070 0.082141343 - - PREDICTED: pentatricopeptide repeat-containing protein At1g56690, mitochondrial [Jatropha curcas]
11 Hb_000107_500 0.0843669622 - - PREDICTED: protein FAR1-RELATED SEQUENCE 9 [Jatropha curcas]
12 Hb_000574_540 0.0887674277 - - ATP binding protein, putative [Ricinus communis]
13 Hb_000140_070 0.0900876471 - - PREDICTED: uncharacterized protein LOC105642935 isoform X1 [Jatropha curcas]
14 Hb_000002_040 0.0906257886 - - hypothetical protein JCGZ_01511 [Jatropha curcas]
15 Hb_002163_030 0.0910642245 - - PREDICTED: serine/threonine protein phosphatase 2A 59 kDa regulatory subunit B' gamma isoform [Jatropha curcas]
16 Hb_002188_110 0.0911533668 desease resistance Gene Name: NB-ARC phosphoprotein phosphatase, putative [Ricinus communis]
17 Hb_001912_100 0.0920739015 - - PREDICTED: uncharacterized protein LOC105636609 [Jatropha curcas]
18 Hb_000959_040 0.0927425033 - - PREDICTED: uncharacterized protein LOC105636570 [Jatropha curcas]
19 Hb_000035_290 0.0929890725 - - RNA recognition motif-containing family protein [Populus trichocarpa]
20 Hb_004602_040 0.0931331817 - - PREDICTED: leukocyte receptor cluster member 8 homolog isoform X1 [Jatropha curcas]

Gene co-expression network

sample Hb_006847_040 Hb_006847_040 Hb_045793_010 Hb_045793_010 Hb_006847_040--Hb_045793_010 Hb_001021_170 Hb_001021_170 Hb_006847_040--Hb_001021_170 Hb_000025_360 Hb_000025_360 Hb_006847_040--Hb_000025_360 Hb_076693_020 Hb_076693_020 Hb_006847_040--Hb_076693_020 Hb_000174_220 Hb_000174_220 Hb_006847_040--Hb_000174_220 Hb_015807_070 Hb_015807_070 Hb_006847_040--Hb_015807_070 Hb_045793_010--Hb_000025_360 Hb_000827_070 Hb_000827_070 Hb_045793_010--Hb_000827_070 Hb_045793_010--Hb_076693_020 Hb_045793_010--Hb_001021_170 Hb_045793_010--Hb_000174_220 Hb_001021_170--Hb_015807_070 Hb_004355_020 Hb_004355_020 Hb_001021_170--Hb_004355_020 Hb_000768_040 Hb_000768_040 Hb_001021_170--Hb_000768_040 Hb_007416_180 Hb_007416_180 Hb_001021_170--Hb_007416_180 Hb_002188_110 Hb_002188_110 Hb_000025_360--Hb_002188_110 Hb_000046_010 Hb_000046_010 Hb_000025_360--Hb_000046_010 Hb_001718_090 Hb_001718_090 Hb_000025_360--Hb_001718_090 Hb_183963_030 Hb_183963_030 Hb_000025_360--Hb_183963_030 Hb_000107_500 Hb_000107_500 Hb_000025_360--Hb_000107_500 Hb_000322_150 Hb_000322_150 Hb_076693_020--Hb_000322_150 Hb_000441_070 Hb_000441_070 Hb_076693_020--Hb_000441_070 Hb_023827_040 Hb_023827_040 Hb_076693_020--Hb_023827_040 Hb_076693_020--Hb_000025_360 Hb_000139_090 Hb_000139_090 Hb_000174_220--Hb_000139_090 Hb_000174_220--Hb_015807_070 Hb_002235_300 Hb_002235_300 Hb_000174_220--Hb_002235_300 Hb_003785_040 Hb_003785_040 Hb_000174_220--Hb_003785_040 Hb_001247_070 Hb_001247_070 Hb_000174_220--Hb_001247_070 Hb_015807_070--Hb_007416_180 Hb_004684_010 Hb_004684_010 Hb_015807_070--Hb_004684_010 Hb_008500_010 Hb_008500_010 Hb_015807_070--Hb_008500_010 Hb_011491_010 Hb_011491_010 Hb_015807_070--Hb_011491_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
278.684 369.718 67.6606 116.699 240.203 326.08
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
210.385 151.053 198.412 146.562 140.016

CAGE analysis