Hb_006856_030

Information

Type -
Description -
Location Contig6856: 27967-34738
Sequence    

Annotation

kegg
ID rcu:RCOM_1538490
description fructose-bisphosphate aldolase, putative (EC:4.1.2.13)
nr
ID KHN43919.1
description Uridine kinase-like protein 4 [Glycine soja]
swissprot
ID P46256
description Fructose-bisphosphate aldolase, cytoplasmic isozyme 1 OS=Pisum sativum PE=2 SV=1
trembl
ID A0A0B2SI36
description Fructose-bisphosphate aldolase OS=Glycine soja GN=glysoja_025958 PE=3 SV=1
Gene Ontology
ID GO:0004332
description fructose-bisphosphate cytoplasmic isozyme 1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_54102: 29445-29613 , PASA_asmbl_54104: 29622-30121 , PASA_asmbl_54105: 30262-30448 , PASA_asmbl_54108: 6738-32140
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_006856_030 0.0 - - Uridine kinase-like protein 4 [Glycine soja]
2 Hb_000402_170 0.1384472045 - - PREDICTED: glutamate--glyoxylate aminotransferase 2 [Jatropha curcas]
3 Hb_003427_080 0.1389724637 - - PREDICTED: probable alanine--tRNA ligase, chloroplastic [Jatropha curcas]
4 Hb_003622_020 0.1427243486 - - PREDICTED: uncharacterized protein At5g39865-like [Jatropha curcas]
5 Hb_000890_110 0.155209399 - - PREDICTED: GTP-binding protein OBGC, chloroplastic [Populus euphratica]
6 Hb_000754_050 0.1584715393 - - PREDICTED: thylakoid lumenal 19 kDa protein, chloroplastic [Jatropha curcas]
7 Hb_003777_020 0.1617900158 - - Fructose-1,6-bisphosphatase, cytosolic, putative [Ricinus communis]
8 Hb_036790_120 0.1637652042 - - PREDICTED: uncharacterized protein LOC105645122 isoform X1 [Jatropha curcas]
9 Hb_000038_020 0.1639694684 - - PREDICTED: ATP-dependent zinc metalloprotease FTSH 2, chloroplastic [Jatropha curcas]
10 Hb_007002_010 0.1646691665 - - PREDICTED: dnaJ protein ERDJ3B [Jatropha curcas]
11 Hb_000661_090 0.1653284394 - - PREDICTED: uncharacterized aarF domain-containing protein kinase At1g79600, chloroplastic [Jatropha curcas]
12 Hb_000352_220 0.1666586676 - - PREDICTED: probable tyrosine--tRNA ligase, mitochondrial [Jatropha curcas]
13 Hb_000014_190 0.1669259288 - - Phytoene dehydrogenase, putative [Ricinus communis]
14 Hb_000189_250 0.1672267815 - - PREDICTED: probable ribose-5-phosphate isomerase 3, chloroplastic [Jatropha curcas]
15 Hb_002671_130 0.1689749804 - - GTP-binding protein typa/bipa, putative [Ricinus communis]
16 Hb_000300_020 0.1701507673 - - PREDICTED: grpE protein homolog, mitochondrial [Jatropha curcas]
17 Hb_000069_490 0.1705296998 - - conserved hypothetical protein [Ricinus communis]
18 Hb_000189_520 0.1720891886 - - PREDICTED: uncharacterized protein LOC105647658 [Jatropha curcas]
19 Hb_001484_080 0.1727172922 - - 2-deoxyglucose-6-phosphate phosphatase, putative [Ricinus communis]
20 Hb_003077_130 0.1730883998 - - hypothetical protein JCGZ_22476 [Jatropha curcas]

Gene co-expression network

sample Hb_006856_030 Hb_006856_030 Hb_000402_170 Hb_000402_170 Hb_006856_030--Hb_000402_170 Hb_003427_080 Hb_003427_080 Hb_006856_030--Hb_003427_080 Hb_003622_020 Hb_003622_020 Hb_006856_030--Hb_003622_020 Hb_000890_110 Hb_000890_110 Hb_006856_030--Hb_000890_110 Hb_000754_050 Hb_000754_050 Hb_006856_030--Hb_000754_050 Hb_003777_020 Hb_003777_020 Hb_006856_030--Hb_003777_020 Hb_000402_170--Hb_003427_080 Hb_036790_120 Hb_036790_120 Hb_000402_170--Hb_036790_120 Hb_000023_210 Hb_000023_210 Hb_000402_170--Hb_000023_210 Hb_000300_020 Hb_000300_020 Hb_000402_170--Hb_000300_020 Hb_001723_030 Hb_001723_030 Hb_000402_170--Hb_001723_030 Hb_002304_180 Hb_002304_180 Hb_000402_170--Hb_002304_180 Hb_000053_120 Hb_000053_120 Hb_003427_080--Hb_000053_120 Hb_000038_020 Hb_000038_020 Hb_003427_080--Hb_000038_020 Hb_000667_140 Hb_000667_140 Hb_003427_080--Hb_000667_140 Hb_003077_130 Hb_003077_130 Hb_003427_080--Hb_003077_130 Hb_166127_030 Hb_166127_030 Hb_003427_080--Hb_166127_030 Hb_000521_090 Hb_000521_090 Hb_003622_020--Hb_000521_090 Hb_126917_010 Hb_126917_010 Hb_003622_020--Hb_126917_010 Hb_003622_020--Hb_003077_130 Hb_003622_020--Hb_003427_080 Hb_002681_080 Hb_002681_080 Hb_003622_020--Hb_002681_080 Hb_007002_010 Hb_007002_010 Hb_000890_110--Hb_007002_010 Hb_000683_080 Hb_000683_080 Hb_000890_110--Hb_000683_080 Hb_158144_020 Hb_158144_020 Hb_000890_110--Hb_158144_020 Hb_000890_110--Hb_000038_020 Hb_000352_220 Hb_000352_220 Hb_000890_110--Hb_000352_220 Hb_168031_020 Hb_168031_020 Hb_000890_110--Hb_168031_020 Hb_001484_080 Hb_001484_080 Hb_000754_050--Hb_001484_080 Hb_000296_080 Hb_000296_080 Hb_000754_050--Hb_000296_080 Hb_005588_110 Hb_005588_110 Hb_000754_050--Hb_005588_110 Hb_000754_050--Hb_000402_170 Hb_000754_050--Hb_036790_120 Hb_000977_270 Hb_000977_270 Hb_000754_050--Hb_000977_270 Hb_002282_070 Hb_002282_070 Hb_003777_020--Hb_002282_070 Hb_002685_060 Hb_002685_060 Hb_003777_020--Hb_002685_060 Hb_016461_030 Hb_016461_030 Hb_003777_020--Hb_016461_030 Hb_000661_090 Hb_000661_090 Hb_003777_020--Hb_000661_090 Hb_000345_370 Hb_000345_370 Hb_003777_020--Hb_000345_370 Hb_001427_040 Hb_001427_040 Hb_003777_020--Hb_001427_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
1.77412 1.86206 4.90914 3.44054 3.51851 1.34165
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
4.92188 2.60925 1.13424 2.59065 28.2346

CAGE analysis