Hb_006873_010

Information

Type -
Description -
Location Contig6873: 5427-6158
Sequence    

Annotation

kegg
ID rcu:RCOM_0574920
description kinase, putative (EC:2.7.10.1)
nr
ID XP_012066192.1
description PREDICTED: probable receptor-like protein kinase At1g67000 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067LE98
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_23772 PE=3 SV=1
Gene Ontology
ID GO:0004672
description probable receptor-like protein kinase at1g67000

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_006873_010 0.0 - - PREDICTED: probable receptor-like protein kinase At1g67000 [Jatropha curcas]
2 Hb_004316_020 0.0898510798 - - PREDICTED: mitogen-activated protein kinase kinase kinase NPK1-like [Jatropha curcas]
3 Hb_004314_020 0.0913419335 - - Auxin-responsive GH3 family protein [Theobroma cacao]
4 Hb_011028_040 0.0952870473 - - receptor serine/threonine kinase, putative [Ricinus communis]
5 Hb_018563_010 0.1133363654 transcription factor TF Family: ERF PREDICTED: ethylene-responsive transcription factor 5-like [Jatropha curcas]
6 Hb_186995_010 0.1159556212 - - hypothetical protein POPTR_0012s01755g [Populus trichocarpa]
7 Hb_009252_090 0.1174732301 transcription factor TF Family: bHLH DNA binding protein, putative [Ricinus communis]
8 Hb_002540_100 0.1251167248 - - PREDICTED: probable inactive leucine-rich repeat receptor-like protein kinase At1g66830 [Jatropha curcas]
9 Hb_015037_010 0.1256883813 - - PREDICTED: cysteine-rich receptor-like protein kinase 10 [Jatropha curcas]
10 Hb_003060_150 0.12688109 - - UDP-glucosyltransferase, putative [Ricinus communis]
11 Hb_003502_040 0.1269142843 - - PREDICTED: pathogen-related protein-like [Jatropha curcas]
12 Hb_000392_170 0.1302004457 - - PREDICTED: protein PHYTOCHROME KINASE SUBSTRATE 3 [Jatropha curcas]
13 Hb_003248_030 0.1307826807 - - Ent-kaurene synthase B, chloroplast precursor, putative [Ricinus communis]
14 Hb_002374_030 0.132632962 - - PREDICTED: probable receptor-like protein kinase At1g11050 isoform X1 [Jatropha curcas]
15 Hb_167206_010 0.133316847 - - hypothetical protein JCGZ_04542 [Jatropha curcas]
16 Hb_160653_010 0.1343020735 - - PREDICTED: putative disease resistance protein RGA4 [Jatropha curcas]
17 Hb_011915_020 0.1356285727 - - PREDICTED: arogenate dehydratase/prephenate dehydratase 6, chloroplastic-like [Jatropha curcas]
18 Hb_001430_010 0.1362411864 - - PREDICTED: LRR receptor-like serine/threonine-protein kinase GSO2 isoform X2 [Jatropha curcas]
19 Hb_000438_200 0.1366987855 - - PREDICTED: protein NRT1/ PTR FAMILY 5.1 [Jatropha curcas]
20 Hb_012496_020 0.1385736519 - - receptor serine/threonine kinase, putative [Ricinus communis]

Gene co-expression network

sample Hb_006873_010 Hb_006873_010 Hb_004316_020 Hb_004316_020 Hb_006873_010--Hb_004316_020 Hb_004314_020 Hb_004314_020 Hb_006873_010--Hb_004314_020 Hb_011028_040 Hb_011028_040 Hb_006873_010--Hb_011028_040 Hb_018563_010 Hb_018563_010 Hb_006873_010--Hb_018563_010 Hb_186995_010 Hb_186995_010 Hb_006873_010--Hb_186995_010 Hb_009252_090 Hb_009252_090 Hb_006873_010--Hb_009252_090 Hb_000392_170 Hb_000392_170 Hb_004316_020--Hb_000392_170 Hb_003502_040 Hb_003502_040 Hb_004316_020--Hb_003502_040 Hb_003248_030 Hb_003248_030 Hb_004316_020--Hb_003248_030 Hb_003207_210 Hb_003207_210 Hb_004316_020--Hb_003207_210 Hb_164337_010 Hb_164337_010 Hb_004316_020--Hb_164337_010 Hb_004314_020--Hb_011028_040 Hb_000170_260 Hb_000170_260 Hb_004314_020--Hb_000170_260 Hb_002849_010 Hb_002849_010 Hb_004314_020--Hb_002849_010 Hb_001032_080 Hb_001032_080 Hb_004314_020--Hb_001032_080 Hb_136973_020 Hb_136973_020 Hb_004314_020--Hb_136973_020 Hb_001333_030 Hb_001333_030 Hb_011028_040--Hb_001333_030 Hb_011028_040--Hb_002849_010 Hb_116103_010 Hb_116103_010 Hb_011028_040--Hb_116103_010 Hb_000904_110 Hb_000904_110 Hb_011028_040--Hb_000904_110 Hb_004553_040 Hb_004553_040 Hb_018563_010--Hb_004553_040 Hb_167206_010 Hb_167206_010 Hb_018563_010--Hb_167206_010 Hb_018563_010--Hb_003502_040 Hb_000438_200 Hb_000438_200 Hb_018563_010--Hb_000438_200 Hb_000319_010 Hb_000319_010 Hb_018563_010--Hb_000319_010 Hb_018563_010--Hb_003248_030 Hb_186995_010--Hb_167206_010 Hb_012496_020 Hb_012496_020 Hb_186995_010--Hb_012496_020 Hb_001277_370 Hb_001277_370 Hb_186995_010--Hb_001277_370 Hb_186995_010--Hb_004553_040 Hb_186995_010--Hb_000319_010 Hb_012400_020 Hb_012400_020 Hb_009252_090--Hb_012400_020 Hb_000592_070 Hb_000592_070 Hb_009252_090--Hb_000592_070 Hb_000069_530 Hb_000069_530 Hb_009252_090--Hb_000069_530 Hb_003060_150 Hb_003060_150 Hb_009252_090--Hb_003060_150 Hb_004551_010 Hb_004551_010 Hb_009252_090--Hb_004551_010 Hb_031266_020 Hb_031266_020 Hb_009252_090--Hb_031266_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 1.10641 2.14494 1.4208 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.0485725 0.237815

CAGE analysis