Hb_006901_040

Information

Type -
Description -
Location Contig6901: 27855-30554
Sequence    

Annotation

kegg
ID rcu:RCOM_0602330
description hypothetical protein
nr
ID XP_002522335.1
description conserved hypothetical protein [Ricinus communis]
swissprot
ID -
description -
trembl
ID B9S8L6
description Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0602330 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_006901_040 0.0 - - conserved hypothetical protein [Ricinus communis]
2 Hb_000212_280 0.0989056142 - - PREDICTED: putative RNA-binding protein Luc7-like 2 [Gossypium raimondii]
3 Hb_113216_010 0.1033605249 - - PREDICTED: calcium-dependent protein kinase 26-like [Jatropha curcas]
4 Hb_002675_190 0.1082789399 - - ABC transporter family protein [Hevea brasiliensis]
5 Hb_000016_180 0.1104043678 - - PREDICTED: calcium-dependent protein kinase 26-like [Jatropha curcas]
6 Hb_000213_060 0.1111558867 - - PREDICTED: RRP12-like protein isoform X1 [Jatropha curcas]
7 Hb_174865_050 0.1128211313 - - PREDICTED: neuroguidin [Jatropha curcas]
8 Hb_000466_060 0.1151587655 - - phosphofructokinase [Hevea brasiliensis]
9 Hb_025048_040 0.1179273094 - - PREDICTED: NAP1-related protein 2 [Jatropha curcas]
10 Hb_000771_160 0.1201863717 - - PREDICTED: abscisic acid receptor PYL8 [Jatropha curcas]
11 Hb_003734_130 0.1203786848 - - PREDICTED: probable ADP-ribosylation factor GTPase-activating protein AGD5 [Jatropha curcas]
12 Hb_000185_090 0.1207798349 desease resistance Gene Name: CDC48_N PREDICTED: cell division cycle protein 48 homolog [Jatropha curcas]
13 Hb_001846_080 0.1225306355 - - PREDICTED: poly(rC)-binding protein 3-like [Nicotiana sylvestris]
14 Hb_001477_010 0.1252993032 - - PREDICTED: dnaJ homolog subfamily B member 13-like [Cicer arietinum]
15 Hb_006173_020 0.1268780137 - - PREDICTED: uncharacterized protein At2g39795, mitochondrial-like [Jatropha curcas]
16 Hb_006478_070 0.1306222455 - - PREDICTED: uncharacterized protein LOC105649957 [Jatropha curcas]
17 Hb_000211_070 0.1320023804 - - isoleucyl tRNA synthetase, putative [Ricinus communis]
18 Hb_001811_060 0.1324698426 - - PREDICTED: nicotinamidase 1-like isoform X1 [Jatropha curcas]
19 Hb_000320_440 0.1349828082 - - PREDICTED: tRNA wybutosine-synthesizing protein 2/3/4 isoform X1 [Jatropha curcas]
20 Hb_000172_530 0.1350787812 - - PREDICTED: UBP1-associated protein 2B-like isoform X1 [Jatropha curcas]

Gene co-expression network

sample Hb_006901_040 Hb_006901_040 Hb_000212_280 Hb_000212_280 Hb_006901_040--Hb_000212_280 Hb_113216_010 Hb_113216_010 Hb_006901_040--Hb_113216_010 Hb_002675_190 Hb_002675_190 Hb_006901_040--Hb_002675_190 Hb_000016_180 Hb_000016_180 Hb_006901_040--Hb_000016_180 Hb_000213_060 Hb_000213_060 Hb_006901_040--Hb_000213_060 Hb_174865_050 Hb_174865_050 Hb_006901_040--Hb_174865_050 Hb_025048_040 Hb_025048_040 Hb_000212_280--Hb_025048_040 Hb_000212_280--Hb_113216_010 Hb_002374_150 Hb_002374_150 Hb_000212_280--Hb_002374_150 Hb_000331_480 Hb_000331_480 Hb_000212_280--Hb_000331_480 Hb_005000_270 Hb_005000_270 Hb_000212_280--Hb_005000_270 Hb_005028_010 Hb_005028_010 Hb_000212_280--Hb_005028_010 Hb_113216_010--Hb_000016_180 Hb_002837_070 Hb_002837_070 Hb_113216_010--Hb_002837_070 Hb_000185_090 Hb_000185_090 Hb_113216_010--Hb_000185_090 Hb_113216_010--Hb_025048_040 Hb_113216_010--Hb_174865_050 Hb_002675_190--Hb_000331_480 Hb_004931_040 Hb_004931_040 Hb_002675_190--Hb_004931_040 Hb_003734_130 Hb_003734_130 Hb_002675_190--Hb_003734_130 Hb_001439_180 Hb_001439_180 Hb_002675_190--Hb_001439_180 Hb_001034_020 Hb_001034_020 Hb_002675_190--Hb_001034_020 Hb_002675_190--Hb_000212_280 Hb_000016_180--Hb_000185_090 Hb_000779_040 Hb_000779_040 Hb_000016_180--Hb_000779_040 Hb_002918_070 Hb_002918_070 Hb_000016_180--Hb_002918_070 Hb_000792_110 Hb_000792_110 Hb_000016_180--Hb_000792_110 Hb_000016_180--Hb_000213_060 Hb_010189_010 Hb_010189_010 Hb_000213_060--Hb_010189_010 Hb_000213_060--Hb_113216_010 Hb_000213_060--Hb_000185_090 Hb_000466_060 Hb_000466_060 Hb_000213_060--Hb_000466_060 Hb_000213_060--Hb_002918_070 Hb_174865_050--Hb_000212_280 Hb_000573_040 Hb_000573_040 Hb_174865_050--Hb_000573_040 Hb_003666_050 Hb_003666_050 Hb_174865_050--Hb_003666_050 Hb_001195_030 Hb_001195_030 Hb_174865_050--Hb_001195_030 Hb_174865_050--Hb_000185_090
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
8.94484 2.22399 0.597356 0.241355 10.8364 16.154
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
4.0542 1.92445 2.80253 3.24881 0.239042

CAGE analysis