Hb_006913_040

Information

Type -
Description -
Location Contig6913: 34860-43895
Sequence    

Annotation

kegg
ID rcu:RCOM_0690340
description hydroxyacylglutathione hydrolase, putative (EC:3.1.2.6)
nr
ID XP_012091104.1
description PREDICTED: hydroxyacylglutathione hydrolase cytoplasmic [Jatropha curcas]
swissprot
ID O24496
description Hydroxyacylglutathione hydrolase cytoplasmic OS=Arabidopsis thaliana GN=GLX2-2 PE=1 SV=2
trembl
ID A0A067JNP2
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_03291 PE=3 SV=1
Gene Ontology
ID GO:0005829
description hydroxyacylglutathione hydrolase cytoplasmic

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_54375: 34927-43866 , PASA_asmbl_54376: 35286-43795 , PASA_asmbl_54377: 37594-38067 , PASA_asmbl_54378: 38268-38646
cDNA
(Sanger)
(ID:Location)		 010_A09.ab1: 35445-43795 , 027_O15.ab1: 35473-43795

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_006913_040 0.0 - - PREDICTED: hydroxyacylglutathione hydrolase cytoplasmic [Jatropha curcas]
2 Hb_000645_150 0.0614430324 - - zinc finger protein, putative [Ricinus communis]
3 Hb_001829_010 0.0621827135 - - PREDICTED: general transcription factor 3C polypeptide 3-like isoform X2 [Jatropha curcas]
4 Hb_001019_170 0.0684509056 - - PREDICTED: uncharacterized protein LOC105639322 [Jatropha curcas]
5 Hb_002820_040 0.0696917518 - - conserved hypothetical protein [Ricinus communis]
6 Hb_002097_090 0.0698472178 - - Splicing factor 3A subunit, putative [Ricinus communis]
7 Hb_000333_100 0.0710950138 - - PREDICTED: tubulin--tyrosine ligase-like protein 12 isoform X1 [Jatropha curcas]
8 Hb_000236_370 0.0734160554 - - PREDICTED: DNA-directed RNA polymerases I and III subunit RPAC1 [Jatropha curcas]
9 Hb_000866_030 0.0754551014 - - hypothetical protein RCOM_1615820 [Ricinus communis]
10 Hb_007317_190 0.077120642 - - PREDICTED: WD-40 repeat-containing protein MSI1 [Jatropha curcas]
11 Hb_008714_020 0.077217636 - - PREDICTED: GTP-binding protein SAR1A-like [Jatropha curcas]
12 Hb_000814_090 0.0781142786 - - conserved hypothetical protein [Ricinus communis]
13 Hb_000076_080 0.0787773378 - - PREDICTED: protein MOS2 [Jatropha curcas]
14 Hb_004450_010 0.078803475 - - PREDICTED: methyltransferase-like protein 10 [Jatropha curcas]
15 Hb_009620_040 0.0794228204 - - PREDICTED: cyclin-T1-3-like [Jatropha curcas]
16 Hb_003581_120 0.082074142 - - PREDICTED: uncharacterized protein LOC105649777 [Jatropha curcas]
17 Hb_002235_320 0.0830929489 - - PREDICTED: polypyrimidine tract-binding protein homolog 1 isoform X1 [Jatropha curcas]
18 Hb_024990_010 0.0840850206 - - PREDICTED: la protein 1 [Jatropha curcas]
19 Hb_000239_070 0.0845616346 - - PREDICTED: activating signal cointegrator 1 complex subunit 2 isoform X1 [Jatropha curcas]
20 Hb_000684_420 0.0852395244 transcription factor TF Family: C3H zinc finger protein, putative [Ricinus communis]

Gene co-expression network

sample Hb_006913_040 Hb_006913_040 Hb_000645_150 Hb_000645_150 Hb_006913_040--Hb_000645_150 Hb_001829_010 Hb_001829_010 Hb_006913_040--Hb_001829_010 Hb_001019_170 Hb_001019_170 Hb_006913_040--Hb_001019_170 Hb_002820_040 Hb_002820_040 Hb_006913_040--Hb_002820_040 Hb_002097_090 Hb_002097_090 Hb_006913_040--Hb_002097_090 Hb_000333_100 Hb_000333_100 Hb_006913_040--Hb_000333_100 Hb_000236_370 Hb_000236_370 Hb_000645_150--Hb_000236_370 Hb_000645_150--Hb_002097_090 Hb_012305_070 Hb_012305_070 Hb_000645_150--Hb_012305_070 Hb_000186_280 Hb_000186_280 Hb_000645_150--Hb_000186_280 Hb_000645_150--Hb_001829_010 Hb_000684_420 Hb_000684_420 Hb_001829_010--Hb_000684_420 Hb_001829_010--Hb_002097_090 Hb_001829_010--Hb_001019_170 Hb_000076_080 Hb_000076_080 Hb_001829_010--Hb_000076_080 Hb_008714_020 Hb_008714_020 Hb_001019_170--Hb_008714_020 Hb_008695_120 Hb_008695_120 Hb_001019_170--Hb_008695_120 Hb_003581_120 Hb_003581_120 Hb_001019_170--Hb_003581_120 Hb_002400_180 Hb_002400_180 Hb_001019_170--Hb_002400_180 Hb_001019_170--Hb_000076_080 Hb_000318_140 Hb_000318_140 Hb_002820_040--Hb_000318_140 Hb_002725_070 Hb_002725_070 Hb_002820_040--Hb_002725_070 Hb_000078_100 Hb_000078_100 Hb_002820_040--Hb_000078_100 Hb_007416_310 Hb_007416_310 Hb_002820_040--Hb_007416_310 Hb_002820_040--Hb_000645_150 Hb_002097_090--Hb_000684_420 Hb_004934_090 Hb_004934_090 Hb_002097_090--Hb_004934_090 Hb_002097_090--Hb_000076_080 Hb_009620_040 Hb_009620_040 Hb_002097_090--Hb_009620_040 Hb_000803_300 Hb_000803_300 Hb_002097_090--Hb_000803_300 Hb_007643_050 Hb_007643_050 Hb_000333_100--Hb_007643_050 Hb_031091_010 Hb_031091_010 Hb_000333_100--Hb_031091_010 Hb_000333_100--Hb_008695_120 Hb_002374_350 Hb_002374_350 Hb_000333_100--Hb_002374_350 Hb_000333_100--Hb_001019_170
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
289.81 188.276 65.5215 92.4324 319.013 477.311
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
220.949 152.209 102.575 152.5 51.8763

CAGE analysis