Hb_006913_050

Information

Type -
Description -
Location Contig6913: 37361-37621
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 027_O15r.ab1: 35286-43451

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_006913_050 0.0 - - -
2 Hb_090545_010 0.183377558 - - PREDICTED: uncharacterized protein LOC105629659 [Jatropha curcas]
3 Hb_003854_020 0.2174113963 transcription factor TF Family: PLATZ protein with unknown function [Ricinus communis]
4 Hb_026337_010 0.2290331586 desease resistance Gene Name: NB-ARC hypothetical protein CICLE_v10002052mg [Citrus clementina]
5 Hb_000123_030 0.2306349022 - - PREDICTED: uncharacterized protein LOC105124982 [Populus euphratica]
6 Hb_141212_010 0.2342876407 - - PREDICTED: uncharacterized protein LOC105124982 [Populus euphratica]
7 Hb_154538_010 0.2390940615 - - -
8 Hb_001251_070 0.2407303213 - - PREDICTED: probable aldo-keto reductase 2, partial [Populus euphratica]
9 Hb_000123_020 0.2553681986 desease resistance Gene Name: NB-ARC PREDICTED: probable disease resistance protein At1g61190 [Vitis vinifera]
10 Hb_004837_050 0.2561220178 - - -
11 Hb_059641_010 0.2569280984 - - PREDICTED: uncharacterized protein LOC105124982 [Populus euphratica]
12 Hb_009848_020 0.2599131424 - - hypothetical protein VITISV_026702 [Vitis vinifera]
13 Hb_002370_030 0.2609852166 - - PREDICTED: uncharacterized protein LOC105636715 [Jatropha curcas]
14 Hb_181441_010 0.2673373961 - - PREDICTED: uncharacterized protein LOC105640851 [Jatropha curcas]
15 Hb_006120_080 0.2684621305 - - PREDICTED: pentatricopeptide repeat-containing protein At3g48810 [Jatropha curcas]
16 Hb_084470_010 0.2703221122 - - Disease resistance protein RPS5, putative [Ricinus communis]
17 Hb_001050_020 0.2703584245 - - -
18 Hb_010605_010 0.2720814182 desease resistance Gene Name: NB-ARC Disease resistance protein RPM1, putative [Ricinus communis]
19 Hb_133127_010 0.2734379563 - - PREDICTED: uncharacterized protein LOC105124982 [Populus euphratica]
20 Hb_148131_010 0.2759150396 - - PREDICTED: ribosome biogenesis protein WDR12-like, partial [Jatropha curcas]

Gene co-expression network

sample Hb_006913_050 Hb_006913_050 Hb_090545_010 Hb_090545_010 Hb_006913_050--Hb_090545_010 Hb_003854_020 Hb_003854_020 Hb_006913_050--Hb_003854_020 Hb_026337_010 Hb_026337_010 Hb_006913_050--Hb_026337_010 Hb_000123_030 Hb_000123_030 Hb_006913_050--Hb_000123_030 Hb_141212_010 Hb_141212_010 Hb_006913_050--Hb_141212_010 Hb_154538_010 Hb_154538_010 Hb_006913_050--Hb_154538_010 Hb_090545_010--Hb_141212_010 Hb_090545_010--Hb_026337_010 Hb_046120_010 Hb_046120_010 Hb_090545_010--Hb_046120_010 Hb_001708_010 Hb_001708_010 Hb_090545_010--Hb_001708_010 Hb_000123_020 Hb_000123_020 Hb_090545_010--Hb_000123_020 Hb_059641_010 Hb_059641_010 Hb_003854_020--Hb_059641_010 Hb_003854_020--Hb_000123_030 Hb_009848_020 Hb_009848_020 Hb_003854_020--Hb_009848_020 Hb_000136_190 Hb_000136_190 Hb_003854_020--Hb_000136_190 Hb_144550_020 Hb_144550_020 Hb_003854_020--Hb_144550_020 Hb_003060_050 Hb_003060_050 Hb_003854_020--Hb_003060_050 Hb_026337_010--Hb_141212_010 Hb_063480_020 Hb_063480_020 Hb_026337_010--Hb_063480_020 Hb_000130_060 Hb_000130_060 Hb_026337_010--Hb_000130_060 Hb_002370_030 Hb_002370_030 Hb_026337_010--Hb_002370_030 Hb_000679_200 Hb_000679_200 Hb_026337_010--Hb_000679_200 Hb_001278_040 Hb_001278_040 Hb_026337_010--Hb_001278_040 Hb_000123_030--Hb_000123_020 Hb_000123_030--Hb_059641_010 Hb_022880_020 Hb_022880_020 Hb_000123_030--Hb_022880_020 Hb_049958_010 Hb_049958_010 Hb_000123_030--Hb_049958_010 Hb_002471_020 Hb_002471_020 Hb_000123_030--Hb_002471_020 Hb_141212_010--Hb_063480_020 Hb_054586_020 Hb_054586_020 Hb_141212_010--Hb_054586_020 Hb_054885_020 Hb_054885_020 Hb_141212_010--Hb_054885_020 Hb_097347_010 Hb_097347_010 Hb_141212_010--Hb_097347_010 Hb_049160_010 Hb_049160_010 Hb_141212_010--Hb_049160_010 Hb_145317_010 Hb_145317_010 Hb_154538_010--Hb_145317_010 Hb_017159_010 Hb_017159_010 Hb_154538_010--Hb_017159_010 Hb_001178_040 Hb_001178_040 Hb_154538_010--Hb_001178_040 Hb_000342_140 Hb_000342_140 Hb_154538_010--Hb_000342_140 Hb_001754_060 Hb_001754_060 Hb_154538_010--Hb_001754_060 Hb_040747_010 Hb_040747_010 Hb_154538_010--Hb_040747_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.477532 6.19071 1.3136 4.19081 0.457404 6.55225
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.434123 0 2.03221 1.22264

CAGE analysis