Hb_006916_020

Information

Type -
Description -
Location Contig6916: 19461-20497
Sequence    

Annotation

kegg
ID rcu:RCOM_0790490
description Flavonol 4'-sulfotransferase, putative (EC:2.8.2.2)
nr
ID XP_002525925.1
description Flavonol 4'-sulfotransferase, putative [Ricinus communis]
swissprot
ID Q9M1V1
description Cytosolic sulfotransferase 6 OS=Arabidopsis thaliana GN=SOT6 PE=2 SV=1
trembl
ID B9SIV6
description Sulfotransferase OS=Ricinus communis GN=RCOM_0790490 PE=3 SV=1
Gene Ontology
ID GO:0016740
description flavonol 4 -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_54404: 20417-20634
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_006916_020 0.0 - - Flavonol 4'-sulfotransferase, putative [Ricinus communis]
2 Hb_000753_180 0.1011175228 - - PREDICTED: dirigent protein 22-like [Jatropha curcas]
3 Hb_004128_090 0.1115831629 transcription factor TF Family: WRKY PREDICTED: WRKY transcription factor 44 [Jatropha curcas]
4 Hb_001004_130 0.1128589712 - - PREDICTED: chalcone synthase 3 [Jatropha curcas]
5 Hb_004010_090 0.1161834208 - - ATP binding protein, putative [Ricinus communis]
6 Hb_004586_110 0.1197135008 - - Aspartic proteinase nepenthesin-1 precursor, putative [Ricinus communis]
7 Hb_001300_140 0.1231274486 - - -
8 Hb_009150_060 0.126826642 - - PREDICTED: cytochrome P450 CYP749A22-like [Prunus mume]
9 Hb_002475_030 0.1269046252 - - conserved hypothetical protein [Ricinus communis]
10 Hb_000844_090 0.128125018 - - PREDICTED: cytochrome P450 82C4-like [Jatropha curcas]
11 Hb_008376_020 0.1303497127 - - hypothetical protein JCGZ_03321 [Jatropha curcas]
12 Hb_009812_010 0.1320060894 - - ABC transporter family protein [Hevea brasiliensis]
13 Hb_000684_490 0.1354059847 transcription factor TF Family: WRKY PREDICTED: WRKY transcription factor 44 [Jatropha curcas]
14 Hb_000836_260 0.1382016167 - - PREDICTED: probable polygalacturonase [Jatropha curcas]
15 Hb_000457_130 0.1394290363 - - hypothetical protein AALP_AA3G009100 [Arabis alpina]
16 Hb_006573_250 0.1395461409 - - PREDICTED: ABC transporter G family member 8 [Jatropha curcas]
17 Hb_000834_210 0.1425785309 - - unnamed protein product [Vitis vinifera]
18 Hb_000471_010 0.1446987839 - - ATP binding protein, putative [Ricinus communis]
19 Hb_000847_120 0.1457363837 - - hypothetical protein JCGZ_15115 [Jatropha curcas]
20 Hb_001545_270 0.1477413728 - - laccase, putative [Ricinus communis]

Gene co-expression network

sample Hb_006916_020 Hb_006916_020 Hb_000753_180 Hb_000753_180 Hb_006916_020--Hb_000753_180 Hb_004128_090 Hb_004128_090 Hb_006916_020--Hb_004128_090 Hb_001004_130 Hb_001004_130 Hb_006916_020--Hb_001004_130 Hb_004010_090 Hb_004010_090 Hb_006916_020--Hb_004010_090 Hb_004586_110 Hb_004586_110 Hb_006916_020--Hb_004586_110 Hb_001300_140 Hb_001300_140 Hb_006916_020--Hb_001300_140 Hb_000753_180--Hb_001300_140 Hb_011440_010 Hb_011440_010 Hb_000753_180--Hb_011440_010 Hb_000836_260 Hb_000836_260 Hb_000753_180--Hb_000836_260 Hb_005333_210 Hb_005333_210 Hb_000753_180--Hb_005333_210 Hb_009150_060 Hb_009150_060 Hb_000753_180--Hb_009150_060 Hb_004128_090--Hb_004010_090 Hb_002475_030 Hb_002475_030 Hb_004128_090--Hb_002475_030 Hb_010839_010 Hb_010839_010 Hb_004128_090--Hb_010839_010 Hb_004128_090--Hb_009150_060 Hb_003085_080 Hb_003085_080 Hb_004128_090--Hb_003085_080 Hb_009812_010 Hb_009812_010 Hb_004128_090--Hb_009812_010 Hb_000844_090 Hb_000844_090 Hb_001004_130--Hb_000844_090 Hb_008376_020 Hb_008376_020 Hb_001004_130--Hb_008376_020 Hb_006573_250 Hb_006573_250 Hb_001004_130--Hb_006573_250 Hb_079394_010 Hb_079394_010 Hb_001004_130--Hb_079394_010 Hb_001005_210 Hb_001005_210 Hb_001004_130--Hb_001005_210 Hb_001004_130--Hb_001300_140 Hb_004010_090--Hb_002475_030 Hb_004010_090--Hb_010839_010 Hb_004010_090--Hb_009150_060 Hb_004010_090--Hb_009812_010 Hb_001514_070 Hb_001514_070 Hb_004010_090--Hb_001514_070 Hb_000471_010 Hb_000471_010 Hb_004586_110--Hb_000471_010 Hb_000684_490 Hb_000684_490 Hb_004586_110--Hb_000684_490 Hb_011861_020 Hb_011861_020 Hb_004586_110--Hb_011861_020 Hb_004586_110--Hb_009812_010 Hb_004586_110--Hb_009150_060 Hb_005168_030 Hb_005168_030 Hb_004586_110--Hb_005168_030 Hb_001300_140--Hb_011440_010 Hb_001300_140--Hb_009150_060 Hb_001300_140--Hb_000836_260 Hb_001300_140--Hb_005333_210 Hb_001300_140--Hb_000844_090
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.210953 0.664223 0.499532 0.0207646 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.0399063 0 2.26284 0.653061

CAGE analysis