Hb_006916_130

Information

Type -
Description -
Location Contig6916: 136519-139824
Sequence    

Annotation

kegg
ID pop:POPTR_0017s13340g
description brassinosteroid-6-oxidase family protein
nr
ID XP_012088057.1
description PREDICTED: cytochrome P450 85A [Jatropha curcas]
swissprot
ID Q69F95
description Cytochrome P450 85A OS=Phaseolus vulgaris GN=BA13 PE=3 SV=2
trembl
ID B9N6N1
description Brassinosteroid-6-oxidase family protein OS=Populus trichocarpa GN=POPTR_0017s13340g PE=4 SV=1
Gene Ontology
ID GO:0004497
description cytochrome p450 85a

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_54425: 136646-136880 , PASA_asmbl_54426: 138155-138573
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_006916_130 0.0 - - PREDICTED: cytochrome P450 85A [Jatropha curcas]
2 Hb_023771_030 0.0827303968 - - unnamed protein product [Vitis vinifera]
3 Hb_012813_020 0.1027559799 - - PREDICTED: glucan endo-1,3-beta-glucosidase, basic isoform-like isoform X2 [Jatropha curcas]
4 Hb_002851_070 0.1118781317 - - PREDICTED: uncharacterized protein LOC105646410 [Jatropha curcas]
5 Hb_005050_030 0.1207542354 - - PREDICTED: wall-associated receptor kinase 2-like [Jatropha curcas]
6 Hb_002151_150 0.1288769499 - - PREDICTED: uncharacterized protein LOC102707106 [Oryza brachyantha]
7 Hb_017358_050 0.1320795047 - - PREDICTED: uncharacterized protein LOC105641552 [Jatropha curcas]
8 Hb_002217_060 0.1387383014 - - PREDICTED: polygalacturonase At1g48100 [Jatropha curcas]
9 Hb_009693_010 0.1400668455 - - PREDICTED: proline-rich receptor-like protein kinase PERK15 [Gossypium raimondii]
10 Hb_000365_440 0.1408455358 - - Acid phosphatase 1 precursor, putative [Ricinus communis]
11 Hb_020273_010 0.1456469035 - - PREDICTED: beta-galactosidase 3 [Jatropha curcas]
12 Hb_040718_010 0.1544354072 - - PREDICTED: beta-glucosidase 18-like [Jatropha curcas]
13 Hb_001244_070 0.1606244972 - - hypothetical protein POPTR_0004s13470g [Populus trichocarpa]
14 Hb_004709_030 0.1636092969 - - PREDICTED: receptor-like protein 12 [Vitis vinifera]
15 Hb_000880_040 0.1639098987 - - -
16 Hb_007382_080 0.1657128955 - - glutaredoxin, grx, putative [Ricinus communis]
17 Hb_007007_130 0.1660388539 transcription factor TF Family: MIKC MADS-box transcription factor 2 [Hevea brasiliensis]
18 Hb_003592_060 0.1671995173 - - hypothetical protein F383_11017 [Gossypium arboreum]
19 Hb_001369_460 0.1686325082 - - vacuolar invertase [Manihot esculenta]
20 Hb_026419_010 0.1715244307 - - PREDICTED: cyclin-D3-1-like [Jatropha curcas]

Gene co-expression network

sample Hb_006916_130 Hb_006916_130 Hb_023771_030 Hb_023771_030 Hb_006916_130--Hb_023771_030 Hb_012813_020 Hb_012813_020 Hb_006916_130--Hb_012813_020 Hb_002851_070 Hb_002851_070 Hb_006916_130--Hb_002851_070 Hb_005050_030 Hb_005050_030 Hb_006916_130--Hb_005050_030 Hb_002151_150 Hb_002151_150 Hb_006916_130--Hb_002151_150 Hb_017358_050 Hb_017358_050 Hb_006916_130--Hb_017358_050 Hb_023771_030--Hb_002851_070 Hb_002217_060 Hb_002217_060 Hb_023771_030--Hb_002217_060 Hb_023771_030--Hb_012813_020 Hb_009693_010 Hb_009693_010 Hb_023771_030--Hb_009693_010 Hb_003592_060 Hb_003592_060 Hb_023771_030--Hb_003592_060 Hb_020273_010 Hb_020273_010 Hb_012813_020--Hb_020273_010 Hb_001369_460 Hb_001369_460 Hb_012813_020--Hb_001369_460 Hb_012813_020--Hb_002217_060 Hb_000205_180 Hb_000205_180 Hb_012813_020--Hb_000205_180 Hb_002851_070--Hb_009693_010 Hb_000880_040 Hb_000880_040 Hb_002851_070--Hb_000880_040 Hb_000152_120 Hb_000152_120 Hb_002851_070--Hb_000152_120 Hb_004446_060 Hb_004446_060 Hb_002851_070--Hb_004446_060 Hb_007007_130 Hb_007007_130 Hb_002851_070--Hb_007007_130 Hb_005050_030--Hb_002151_150 Hb_040718_010 Hb_040718_010 Hb_005050_030--Hb_040718_010 Hb_000365_440 Hb_000365_440 Hb_005050_030--Hb_000365_440 Hb_002701_170 Hb_002701_170 Hb_005050_030--Hb_002701_170 Hb_000947_010 Hb_000947_010 Hb_005050_030--Hb_000947_010 Hb_005050_030--Hb_009693_010 Hb_002151_150--Hb_002701_170 Hb_002151_150--Hb_040718_010 Hb_002151_150--Hb_000365_440 Hb_000560_060 Hb_000560_060 Hb_002151_150--Hb_000560_060 Hb_006789_020 Hb_006789_020 Hb_002151_150--Hb_006789_020 Hb_007382_080 Hb_007382_080 Hb_017358_050--Hb_007382_080 Hb_017358_050--Hb_023771_030 Hb_000359_180 Hb_000359_180 Hb_017358_050--Hb_000359_180 Hb_000077_300 Hb_000077_300 Hb_017358_050--Hb_000077_300 Hb_017358_050--Hb_002217_060
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 3.95326 1.62005 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0267528 0 0 2.14718 1.94768

CAGE analysis