Hb_006920_040

Information

Type -
Description -
Location Contig6920: 32257-33854
Sequence    

Annotation

kegg
ID pmum:103341644
description uncharacterized LOC103341644
nr
ID XP_008243410.1
description PREDICTED: uncharacterized protein LOC103341644 [Prunus mume]
swissprot
ID -
description -
trembl
ID A0A067JJJ6
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_25724 PE=4 SV=1
Gene Ontology
ID GO:0008810
description endo- -beta-glucanase

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_006920_040 0.0 - - PREDICTED: uncharacterized protein LOC103341644 [Prunus mume]
2 Hb_008554_090 0.1399232592 - - zinc finger protein, putative [Ricinus communis]
3 Hb_000424_100 0.1409510759 desease resistance Gene Name: G-alpha GTP-binding protein (p) alpha subunit, gpa1, putative [Ricinus communis]
4 Hb_001345_010 0.1695298068 - - hypothetical protein MIMGU_mgv1a010889mg [Erythranthe guttata]
5 Hb_002110_060 0.172942616 - - PREDICTED: serine/threonine-protein kinase-like protein At1g28390 [Jatropha curcas]
6 Hb_011472_020 0.1743416469 - - PREDICTED: mucin-17-like [Jatropha curcas]
7 Hb_150730_010 0.1756404741 - - PREDICTED: cytochrome P450 81E8-like [Jatropha curcas]
8 Hb_004525_110 0.1757319028 - - hypothetical protein POPTR_0007s12850g [Populus trichocarpa]
9 Hb_001832_240 0.1769140584 - - PREDICTED: venom phosphodiesterase 2 [Jatropha curcas]
10 Hb_005730_070 0.1771003968 desease resistance Gene Name: ABC_membrane PREDICTED: ABC transporter C family member 8 [Jatropha curcas]
11 Hb_039022_020 0.1784878574 - - PREDICTED: LRR receptor-like serine/threonine-protein kinase EFR [Jatropha curcas]
12 Hb_000501_110 0.1829209843 - - PREDICTED: probably inactive leucine-rich repeat receptor-like protein kinase At5g48380 [Populus euphratica]
13 Hb_033312_050 0.1860429458 - - PREDICTED: uncharacterized protein LOC105638598, partial [Jatropha curcas]
14 Hb_009778_050 0.186256667 - - hypothetical protein JCGZ_08917 [Jatropha curcas]
15 Hb_005542_040 0.1871525412 transcription factor TF Family: WRKY PREDICTED: WRKY transcription factor 55 [Jatropha curcas]
16 Hb_001318_120 0.1886977819 - - PREDICTED: uncharacterized protein LOC105642675 [Jatropha curcas]
17 Hb_166009_010 0.1888957041 - - carbonyl reductase, putative [Ricinus communis]
18 Hb_001349_020 0.1892356979 - - PREDICTED: leucoanthocyanidin reductase-like [Jatropha curcas]
19 Hb_003842_010 0.1921849995 - - receptor protein kinase, putative [Ricinus communis]
20 Hb_162286_030 0.1931105819 - - PREDICTED: uncharacterized protein LOC105650163 [Jatropha curcas]

Gene co-expression network

sample Hb_006920_040 Hb_006920_040 Hb_008554_090 Hb_008554_090 Hb_006920_040--Hb_008554_090 Hb_000424_100 Hb_000424_100 Hb_006920_040--Hb_000424_100 Hb_001345_010 Hb_001345_010 Hb_006920_040--Hb_001345_010 Hb_002110_060 Hb_002110_060 Hb_006920_040--Hb_002110_060 Hb_011472_020 Hb_011472_020 Hb_006920_040--Hb_011472_020 Hb_150730_010 Hb_150730_010 Hb_006920_040--Hb_150730_010 Hb_008554_090--Hb_002110_060 Hb_005730_070 Hb_005730_070 Hb_008554_090--Hb_005730_070 Hb_009070_030 Hb_009070_030 Hb_008554_090--Hb_009070_030 Hb_004525_110 Hb_004525_110 Hb_008554_090--Hb_004525_110 Hb_008554_090--Hb_150730_010 Hb_042083_060 Hb_042083_060 Hb_008554_090--Hb_042083_060 Hb_000739_160 Hb_000739_160 Hb_000424_100--Hb_000739_160 Hb_000679_260 Hb_000679_260 Hb_000424_100--Hb_000679_260 Hb_000411_050 Hb_000411_050 Hb_000424_100--Hb_000411_050 Hb_166009_010 Hb_166009_010 Hb_000424_100--Hb_166009_010 Hb_000096_210 Hb_000096_210 Hb_000424_100--Hb_000096_210 Hb_007676_040 Hb_007676_040 Hb_001345_010--Hb_007676_040 Hb_003842_010 Hb_003842_010 Hb_001345_010--Hb_003842_010 Hb_000521_360 Hb_000521_360 Hb_001345_010--Hb_000521_360 Hb_005542_040 Hb_005542_040 Hb_001345_010--Hb_005542_040 Hb_001565_010 Hb_001565_010 Hb_001345_010--Hb_001565_010 Hb_005276_220 Hb_005276_220 Hb_001345_010--Hb_005276_220 Hb_002110_060--Hb_009070_030 Hb_162286_030 Hb_162286_030 Hb_002110_060--Hb_162286_030 Hb_000009_130 Hb_000009_130 Hb_002110_060--Hb_000009_130 Hb_002110_060--Hb_005730_070 Hb_001454_290 Hb_001454_290 Hb_002110_060--Hb_001454_290 Hb_011472_020--Hb_005276_220 Hb_010519_020 Hb_010519_020 Hb_011472_020--Hb_010519_020 Hb_001318_120 Hb_001318_120 Hb_011472_020--Hb_001318_120 Hb_001421_010 Hb_001421_010 Hb_011472_020--Hb_001421_010 Hb_000403_110 Hb_000403_110 Hb_011472_020--Hb_000403_110 Hb_039022_020 Hb_039022_020 Hb_011472_020--Hb_039022_020 Hb_011861_020 Hb_011861_020 Hb_150730_010--Hb_011861_020 Hb_000057_180 Hb_000057_180 Hb_150730_010--Hb_000057_180 Hb_002003_030 Hb_002003_030 Hb_150730_010--Hb_002003_030 Hb_009778_050 Hb_009778_050 Hb_150730_010--Hb_009778_050 Hb_116469_010 Hb_116469_010 Hb_150730_010--Hb_116469_010 Hb_000471_010 Hb_000471_010 Hb_150730_010--Hb_000471_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.201544 0.331151 0.155531 0 0.056033
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.491094 0.0783222

CAGE analysis