Hb_006925_070

Information

Type -
Description -
Location Contig6925: 115527-119433
Sequence    

Annotation

kegg
ID rcu:RCOM_1684990
description map3k delta-1 protein kinase, putative (EC:2.7.11.25)
nr
ID KDP25496.1
description hypothetical protein JCGZ_20652 [Jatropha curcas]
swissprot
ID Q9FPR3
description Serine/threonine-protein kinase EDR1 OS=Arabidopsis thaliana GN=EDR1 PE=1 SV=1
trembl
ID A0A067JND1
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_20652 PE=3 SV=1
Gene Ontology
ID GO:0005829
description map3k delta-1 protein

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_006925_070 0.0 - - hypothetical protein JCGZ_20652 [Jatropha curcas]
2 Hb_000853_100 0.1902260756 transcription factor TF Family: ERF PREDICTED: ethylene-responsive transcription factor ERF073 [Jatropha curcas]
3 Hb_000608_020 0.1930001846 - - PREDICTED: wall-associated receptor kinase-like 22 [Jatropha curcas]
4 Hb_020967_010 0.201401553 - - -
5 Hb_006916_200 0.2117145738 - - hypothetical protein POPTR_0017s13190g, partial [Populus trichocarpa]
6 Hb_004453_180 0.217367521 - - hypothetical protein JCGZ_07188 [Jatropha curcas]
7 Hb_001377_500 0.2202882738 - - DOF AFFECTING GERMINATION 2 family protein [Populus trichocarpa]
8 Hb_000856_050 0.2245257043 - - PREDICTED: HIPL1 protein-like [Jatropha curcas]
9 Hb_000465_260 0.2255320351 transcription factor TF Family: HB PREDICTED: homeobox-leucine zipper protein HAT4-like [Jatropha curcas]
10 Hb_002918_150 0.2255697849 transcription factor TF Family: ERF ethylene-responsive element binding protein 1 [Hevea brasiliensis]
11 Hb_001791_010 0.2259898499 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At5g63710 [Jatropha curcas]
12 Hb_004631_110 0.2263168605 - - ring finger protein, putative [Ricinus communis]
13 Hb_000000_140 0.2264322503 - - -
14 Hb_103788_010 0.2278578335 - - hypothetical protein POPTR_0013s02830g [Populus trichocarpa]
15 Hb_003531_040 0.2282202089 transcription factor TF Family: HB homeobox protein, putative [Ricinus communis]
16 Hb_001454_360 0.2284840475 - - PREDICTED: bidirectional sugar transporter SWEET17 [Jatropha curcas]
17 Hb_000345_500 0.2297472804 - - PREDICTED: peroxisomal adenine nucleotide carrier 1 [Jatropha curcas]
18 Hb_006615_160 0.2300366487 - - PREDICTED: UDP-glycosyltransferase 89B1-like [Jatropha curcas]
19 Hb_000840_070 0.2301904984 desease resistance Gene Name: NB-ARC leucine-rich repeat-containing protein, putative [Ricinus communis]
20 Hb_002035_030 0.2302782833 - - hypothetical protein PRUPE_ppa003221mg [Prunus persica]

Gene co-expression network

sample Hb_006925_070 Hb_006925_070 Hb_000853_100 Hb_000853_100 Hb_006925_070--Hb_000853_100 Hb_000608_020 Hb_000608_020 Hb_006925_070--Hb_000608_020 Hb_020967_010 Hb_020967_010 Hb_006925_070--Hb_020967_010 Hb_006916_200 Hb_006916_200 Hb_006925_070--Hb_006916_200 Hb_004453_180 Hb_004453_180 Hb_006925_070--Hb_004453_180 Hb_001377_500 Hb_001377_500 Hb_006925_070--Hb_001377_500 Hb_000172_050 Hb_000172_050 Hb_000853_100--Hb_000172_050 Hb_017857_010 Hb_017857_010 Hb_000853_100--Hb_017857_010 Hb_000776_050 Hb_000776_050 Hb_000853_100--Hb_000776_050 Hb_006615_160 Hb_006615_160 Hb_000853_100--Hb_006615_160 Hb_000345_500 Hb_000345_500 Hb_000853_100--Hb_000345_500 Hb_008380_010 Hb_008380_010 Hb_000853_100--Hb_008380_010 Hb_002660_100 Hb_002660_100 Hb_000608_020--Hb_002660_100 Hb_000608_020--Hb_001377_500 Hb_000429_110 Hb_000429_110 Hb_000608_020--Hb_000429_110 Hb_001558_070 Hb_001558_070 Hb_000608_020--Hb_001558_070 Hb_001259_100 Hb_001259_100 Hb_000608_020--Hb_001259_100 Hb_002928_180 Hb_002928_180 Hb_000608_020--Hb_002928_180 Hb_053519_010 Hb_053519_010 Hb_020967_010--Hb_053519_010 Hb_000336_190 Hb_000336_190 Hb_020967_010--Hb_000336_190 Hb_001472_140 Hb_001472_140 Hb_020967_010--Hb_001472_140 Hb_000003_760 Hb_000003_760 Hb_020967_010--Hb_000003_760 Hb_003531_040 Hb_003531_040 Hb_020967_010--Hb_003531_040 Hb_105660_010 Hb_105660_010 Hb_020967_010--Hb_105660_010 Hb_006916_200--Hb_003531_040 Hb_003913_030 Hb_003913_030 Hb_006916_200--Hb_003913_030 Hb_000008_110 Hb_000008_110 Hb_006916_200--Hb_000008_110 Hb_006916_200--Hb_000345_500 Hb_000220_090 Hb_000220_090 Hb_006916_200--Hb_000220_090 Hb_001511_190 Hb_001511_190 Hb_006916_200--Hb_001511_190 Hb_004453_180--Hb_105660_010 Hb_004453_180--Hb_020967_010 Hb_103788_010 Hb_103788_010 Hb_004453_180--Hb_103788_010 Hb_012760_060 Hb_012760_060 Hb_004453_180--Hb_012760_060 Hb_003637_020 Hb_003637_020 Hb_004453_180--Hb_003637_020 Hb_000270_770 Hb_000270_770 Hb_004453_180--Hb_000270_770 Hb_001195_500 Hb_001195_500 Hb_001377_500--Hb_001195_500 Hb_002035_030 Hb_002035_030 Hb_001377_500--Hb_002035_030 Hb_000000_140 Hb_000000_140 Hb_001377_500--Hb_000000_140 Hb_002609_150 Hb_002609_150 Hb_001377_500--Hb_002609_150 Hb_002272_140 Hb_002272_140 Hb_001377_500--Hb_002272_140
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0289356 0.508505 0.0987398 0.287 0.0135504 0.0146191
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.098926 0.0259419 0.048649 0.16579 0

CAGE analysis