Hb_006938_050

Information

Type -
Description -
Location Contig6938: 46519-46743
Sequence    

Annotation

kegg
ID rcu:RCOM_0336790
description hypothetical protein
nr
ID XP_012089910.1
description PREDICTED: uncharacterized protein LOC105648204 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067JFN7
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_02494 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_006938_050 0.0 - - PREDICTED: uncharacterized protein LOC105648204 [Jatropha curcas]
2 Hb_000837_010 0.2335974495 - - PREDICTED: uncharacterized protein LOC104894399 [Beta vulgaris subsp. vulgaris]
3 Hb_132840_070 0.2349198301 - - metal tolerance protein 1 [Populus trichocarpa x Populus deltoides]
4 Hb_002743_040 0.2349502027 - - PREDICTED: uncharacterized protein LOC105785507 isoform X2 [Gossypium raimondii]
5 Hb_000705_270 0.2611422327 - - PREDICTED: uncharacterized protein LOC105131117 [Populus euphratica]
6 Hb_000035_020 0.2704879647 - - PREDICTED: omega-hydroxypalmitate O-feruloyl transferase [Jatropha curcas]
7 Hb_069696_010 0.2705708323 - - hypothetical protein POPTR_0003s21190g [Populus trichocarpa]
8 Hb_001142_010 0.2768778961 - - PREDICTED: alcohol dehydrogenase-like 6 [Jatropha curcas]
9 Hb_052764_100 0.2796125583 - - PREDICTED: beta-galactosidase 8-like [Jatropha curcas]
10 Hb_001558_050 0.2818353567 - - PREDICTED: uncharacterized protein LOC105641745 [Jatropha curcas]
11 Hb_000336_230 0.2969001274 transcription factor TF Family: mTERF hypothetical protein PRUPE_ppa007609mg [Prunus persica]
12 Hb_000077_360 0.2974655006 - - sugar transporter, putative [Ricinus communis]
13 Hb_000381_010 0.2998361513 - - PREDICTED: arogenate dehydratase/prephenate dehydratase 1, chloroplastic-like [Jatropha curcas]
14 Hb_001033_070 0.3000721554 - - seryl-tRNA synthetase, putative [Ricinus communis]
15 Hb_000106_030 0.3016423451 - - amino acid transporter, putative [Ricinus communis]
16 Hb_000460_070 0.3035398365 - - luminal binding protein [Gossypium hirsutum]
17 Hb_004870_040 0.3047166232 - - -
18 Hb_181026_010 0.3119494634 - - Auxin-induced protein 5NG4, putative [Ricinus communis]
19 Hb_054467_010 0.3127629467 - - -
20 Hb_007181_020 0.3141772383 - - PREDICTED: uncharacterized protein At4g04980-like [Populus euphratica]

Gene co-expression network

sample Hb_006938_050 Hb_006938_050 Hb_000837_010 Hb_000837_010 Hb_006938_050--Hb_000837_010 Hb_132840_070 Hb_132840_070 Hb_006938_050--Hb_132840_070 Hb_002743_040 Hb_002743_040 Hb_006938_050--Hb_002743_040 Hb_000705_270 Hb_000705_270 Hb_006938_050--Hb_000705_270 Hb_000035_020 Hb_000035_020 Hb_006938_050--Hb_000035_020 Hb_069696_010 Hb_069696_010 Hb_006938_050--Hb_069696_010 Hb_001558_050 Hb_001558_050 Hb_000837_010--Hb_001558_050 Hb_052764_100 Hb_052764_100 Hb_000837_010--Hb_052764_100 Hb_172665_010 Hb_172665_010 Hb_000837_010--Hb_172665_010 Hb_004218_260 Hb_004218_260 Hb_000837_010--Hb_004218_260 Hb_000460_070 Hb_000460_070 Hb_000837_010--Hb_000460_070 Hb_000106_030 Hb_000106_030 Hb_132840_070--Hb_000106_030 Hb_132840_070--Hb_069696_010 Hb_000077_360 Hb_000077_360 Hb_132840_070--Hb_000077_360 Hb_001142_010 Hb_001142_010 Hb_132840_070--Hb_001142_010 Hb_000336_230 Hb_000336_230 Hb_132840_070--Hb_000336_230 Hb_015675_030 Hb_015675_030 Hb_132840_070--Hb_015675_030 Hb_000192_020 Hb_000192_020 Hb_002743_040--Hb_000192_020 Hb_002743_040--Hb_132840_070 Hb_002743_040--Hb_069696_010 Hb_003304_110 Hb_003304_110 Hb_002743_040--Hb_003304_110 Hb_002320_080 Hb_002320_080 Hb_002743_040--Hb_002320_080 Hb_000705_270--Hb_000035_020 Hb_000975_170 Hb_000975_170 Hb_000705_270--Hb_000975_170 Hb_001221_240 Hb_001221_240 Hb_000705_270--Hb_001221_240 Hb_000392_530 Hb_000392_530 Hb_000705_270--Hb_000392_530 Hb_159308_020 Hb_159308_020 Hb_000705_270--Hb_159308_020 Hb_000226_120 Hb_000226_120 Hb_000705_270--Hb_000226_120 Hb_134813_010 Hb_134813_010 Hb_000035_020--Hb_134813_010 Hb_021313_010 Hb_021313_010 Hb_000035_020--Hb_021313_010 Hb_031330_020 Hb_031330_020 Hb_000035_020--Hb_031330_020 Hb_000683_080 Hb_000683_080 Hb_000035_020--Hb_000683_080 Hb_000300_680 Hb_000300_680 Hb_000035_020--Hb_000300_680 Hb_011053_020 Hb_011053_020 Hb_000035_020--Hb_011053_020 Hb_000310_100 Hb_000310_100 Hb_069696_010--Hb_000310_100 Hb_025466_010 Hb_025466_010 Hb_069696_010--Hb_025466_010 Hb_001863_020 Hb_001863_020 Hb_069696_010--Hb_001863_020 Hb_069696_010--Hb_001142_010 Hb_010422_070 Hb_010422_070 Hb_069696_010--Hb_010422_070
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0 2.06574 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.899412 0.719176 1.69422 1.3529 3.57717

CAGE analysis