Hb_006953_010

Information

Type -
Description -
Location Contig6953: 25248-26924
Sequence    

Annotation

kegg
ID rcu:RCOM_1592830
description cytochrome P450, putative (EC:1.14.13.88)
nr
ID XP_002510305.1
description cytochrome P450, putative [Ricinus communis]
swissprot
ID Q43068
description Cytochrome P450 82A1 (Fragment) OS=Pisum sativum GN=CYP82A1 PE=2 SV=2
trembl
ID B9R7L2
description Cytochrome P450, putative OS=Ricinus communis GN=RCOM_1592830 PE=3 SV=1
Gene Ontology
ID GO:0005506
description cytochrome p450 cyp82d47-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_006953_010 0.0 - - cytochrome P450, putative [Ricinus communis]
2 Hb_002049_040 0.002082525 - - PREDICTED: protein UNUSUAL FLORAL ORGANS [Jatropha curcas]
3 Hb_107495_020 0.0028051531 - - PREDICTED: GDSL esterase/lipase At1g71691 [Jatropha curcas]
4 Hb_182291_010 0.0031547726 - - hypothetical protein CICLE_v10029654mg [Citrus clementina]
5 Hb_001536_070 0.0035482594 - - hypothetical protein JCGZ_20053 [Jatropha curcas]
6 Hb_000265_040 0.0036635527 - - PREDICTED: subtilisin-like protease, partial [Prunus mume]
7 Hb_004598_010 0.004378397 - - PREDICTED: 11-beta-hydroxysteroid dehydrogenase-like 5 [Jatropha curcas]
8 Hb_001372_010 0.0047062185 - - ankyrin repeat-containing protein, putative [Ricinus communis]
9 Hb_075653_010 0.0076758876 - - PREDICTED: tyrosine decarboxylase 1-like [Jatropha curcas]
10 Hb_001171_020 0.0077394171 - - PREDICTED: gibberellin 3-beta-dioxygenase 3-like [Citrus sinensis]
11 Hb_002305_040 0.0086504127 - - TMV resistance protein N, putative [Ricinus communis]
12 Hb_000514_010 0.0131496769 - - PREDICTED: probable indole-3-pyruvate monooxygenase YUCCA4 [Jatropha curcas]
13 Hb_004228_050 0.0142532661 - - PREDICTED: tubulin beta chain-like [Jatropha curcas]
14 Hb_000592_150 0.0151872192 - - Os05g0413200 [Oryza sativa Japonica Group]
15 Hb_004722_050 0.0239425258 - - hypothetical protein POPTR_0011s02010g [Populus trichocarpa]
16 Hb_002585_050 0.024212561 - - conserved hypothetical protein [Ricinus communis]
17 Hb_007816_010 0.031941788 - - cyanohydrin UDP-glucosyltransferase UGT85K5 [Manihot esculenta]
18 Hb_000227_010 0.032249974 - - hypothetical protein JCGZ_02114 [Jatropha curcas]
19 Hb_001926_050 0.0338743668 - - PREDICTED: peroxidase 19 [Jatropha curcas]
20 Hb_002837_010 0.0368571382 - - hypothetical protein POPTR_0497s00200g [Populus trichocarpa]

Gene co-expression network

sample Hb_006953_010 Hb_006953_010 Hb_002049_040 Hb_002049_040 Hb_006953_010--Hb_002049_040 Hb_107495_020 Hb_107495_020 Hb_006953_010--Hb_107495_020 Hb_182291_010 Hb_182291_010 Hb_006953_010--Hb_182291_010 Hb_001536_070 Hb_001536_070 Hb_006953_010--Hb_001536_070 Hb_000265_040 Hb_000265_040 Hb_006953_010--Hb_000265_040 Hb_004598_010 Hb_004598_010 Hb_006953_010--Hb_004598_010 Hb_002049_040--Hb_182291_010 Hb_002049_040--Hb_004598_010 Hb_001372_010 Hb_001372_010 Hb_002049_040--Hb_001372_010 Hb_002049_040--Hb_107495_020 Hb_002049_040--Hb_001536_070 Hb_107495_020--Hb_001536_070 Hb_107495_020--Hb_000265_040 Hb_075653_010 Hb_075653_010 Hb_107495_020--Hb_075653_010 Hb_002305_040 Hb_002305_040 Hb_107495_020--Hb_002305_040 Hb_182291_010--Hb_004598_010 Hb_182291_010--Hb_001372_010 Hb_001171_020 Hb_001171_020 Hb_182291_010--Hb_001171_020 Hb_182291_010--Hb_107495_020 Hb_001536_070--Hb_000265_040 Hb_001536_070--Hb_075653_010 Hb_001536_070--Hb_002305_040 Hb_000265_040--Hb_075653_010 Hb_000265_040--Hb_002305_040 Hb_000265_040--Hb_002049_040 Hb_004598_010--Hb_001372_010 Hb_004598_010--Hb_001171_020 Hb_004598_010--Hb_107495_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.29529 0.043945 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0

CAGE analysis