Hb_006970_150

Information

Type -
Description -
Location Contig6970: 116667-120335
Sequence    

Annotation

kegg
ID rcu:RCOM_1577210
description hypothetical protein
nr
ID XP_012092772.1
description PREDICTED: uncharacterized protein LOC105650471 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067JL36
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_07909 PE=4 SV=1
Gene Ontology
ID GO:0005886
description PREDICTED: uncharacterized protein LOC105650471

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_006970_150 0.0 - - PREDICTED: uncharacterized protein LOC105650471 [Jatropha curcas]
2 Hb_033045_010 0.1040136004 - - copine, putative [Ricinus communis]
3 Hb_000075_110 0.1054273725 - - aldo-keto reductase, putative [Ricinus communis]
4 Hb_002518_270 0.108064882 - - glycogen phosphorylase, putative [Ricinus communis]
5 Hb_000120_070 0.1091493194 - - PREDICTED: uncharacterized protein LOC105630351 [Jatropha curcas]
6 Hb_000265_020 0.1107919344 - - hypothetical protein POPTR_0011s16980g, partial [Populus trichocarpa]
7 Hb_008948_080 0.1120126388 - - PREDICTED: TBC1 domain family member 13-like isoform X1 [Jatropha curcas]
8 Hb_000223_050 0.1216210816 - - PREDICTED: endochitinase A-like [Jatropha curcas]
9 Hb_002085_070 0.1218523448 transcription factor TF Family: C2H2 nucleic acid binding protein, putative [Ricinus communis]
10 Hb_004459_110 0.1300342803 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase SD2-5 isoform X2 [Populus euphratica]
11 Hb_075449_040 0.1303529923 - - PREDICTED: meiotic recombination protein SPO11-1 [Jatropha curcas]
12 Hb_012018_020 0.1308562648 - - PREDICTED: proline-rich receptor-like protein kinase PERK15 [Eucalyptus grandis]
13 Hb_007765_140 0.1324126777 - - PREDICTED: protein NRT1/ PTR FAMILY 8.1-like [Jatropha curcas]
14 Hb_003556_070 0.1326077578 - - metal ion binding protein, putative [Ricinus communis]
15 Hb_003337_050 0.134947184 - - PREDICTED: probable protein phosphatase 2C 78 [Jatropha curcas]
16 Hb_165404_010 0.1372400706 - - PREDICTED: high affinity nitrate transporter 2.5 [Jatropha curcas]
17 Hb_001374_040 0.1412601476 - - PREDICTED: calcium-transporting ATPase 1, endoplasmic reticulum-type-like [Gossypium raimondii]
18 Hb_073119_010 0.1413458219 - - hypothetical protein POPTR_0004s20690g [Populus trichocarpa]
19 Hb_000008_080 0.1417992661 - - conserved hypothetical protein [Ricinus communis]
20 Hb_000252_080 0.1422225273 - - PREDICTED: uncharacterized protein LOC105644644 [Jatropha curcas]

Gene co-expression network

sample Hb_006970_150 Hb_006970_150 Hb_033045_010 Hb_033045_010 Hb_006970_150--Hb_033045_010 Hb_000075_110 Hb_000075_110 Hb_006970_150--Hb_000075_110 Hb_002518_270 Hb_002518_270 Hb_006970_150--Hb_002518_270 Hb_000120_070 Hb_000120_070 Hb_006970_150--Hb_000120_070 Hb_000265_020 Hb_000265_020 Hb_006970_150--Hb_000265_020 Hb_008948_080 Hb_008948_080 Hb_006970_150--Hb_008948_080 Hb_033045_010--Hb_000265_020 Hb_063523_010 Hb_063523_010 Hb_033045_010--Hb_063523_010 Hb_000489_020 Hb_000489_020 Hb_033045_010--Hb_000489_020 Hb_003337_050 Hb_003337_050 Hb_033045_010--Hb_003337_050 Hb_031862_020 Hb_031862_020 Hb_033045_010--Hb_031862_020 Hb_165404_010 Hb_165404_010 Hb_000075_110--Hb_165404_010 Hb_007765_140 Hb_007765_140 Hb_000075_110--Hb_007765_140 Hb_000598_020 Hb_000598_020 Hb_000075_110--Hb_000598_020 Hb_000075_110--Hb_000120_070 Hb_008215_010 Hb_008215_010 Hb_000075_110--Hb_008215_010 Hb_006501_170 Hb_006501_170 Hb_002518_270--Hb_006501_170 Hb_002518_270--Hb_003337_050 Hb_002518_270--Hb_033045_010 Hb_002518_270--Hb_008948_080 Hb_001946_060 Hb_001946_060 Hb_002518_270--Hb_001946_060 Hb_000836_390 Hb_000836_390 Hb_000120_070--Hb_000836_390 Hb_000120_070--Hb_007765_140 Hb_000120_070--Hb_008215_010 Hb_003556_070 Hb_003556_070 Hb_000120_070--Hb_003556_070 Hb_000265_020--Hb_000489_020 Hb_002085_070 Hb_002085_070 Hb_000265_020--Hb_002085_070 Hb_000521_290 Hb_000521_290 Hb_000265_020--Hb_000521_290 Hb_012018_020 Hb_012018_020 Hb_000265_020--Hb_012018_020 Hb_000723_120 Hb_000723_120 Hb_008948_080--Hb_000723_120 Hb_008948_080--Hb_000120_070 Hb_008948_080--Hb_006501_170 Hb_004459_110 Hb_004459_110 Hb_008948_080--Hb_004459_110
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0511745 9.41207 3.53939 1.53394 0.00958181 0.0188341
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0930607 0.146444 0.034687 5.05557 1.2756

CAGE analysis