Hb_006992_010

Information

Type -
Description -
Location Contig6992: 1-791
Sequence    

Annotation

kegg
ID pop:POPTR_0017s01950g
description hypothetical protein
nr
ID KDP43125.1
description hypothetical protein JCGZ_26658 [Jatropha curcas]
swissprot
ID Q7XA39
description Putative disease resistance protein RGA4 OS=Solanum bulbocastanum GN=RGA4 PE=2 SV=1
trembl
ID A0A067LF36
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_26658 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_006992_010 0.0 - - hypothetical protein JCGZ_26658 [Jatropha curcas]
2 Hb_000963_120 0.1031893141 - - PREDICTED: uncharacterized protein LOC105628103 isoform X1 [Jatropha curcas]
3 Hb_004374_030 0.1072497083 - - PREDICTED: probable polygalacturonase [Jatropha curcas]
4 Hb_113766_010 0.1114983954 - - plasma membrane H+ ATPase, partial [Nicotiana plumbaginifolia]
5 Hb_002391_240 0.11488516 - - conserved hypothetical protein [Ricinus communis]
6 Hb_026198_020 0.1150505506 - - PREDICTED: uncharacterized protein LOC105634368 [Jatropha curcas]
7 Hb_000309_070 0.1155977932 - - PREDICTED: 2-methylene-furan-3-one reductase [Cucumis melo]
8 Hb_002119_110 0.1191316239 - - PREDICTED: probable xyloglucan endotransglucosylase/hydrolase protein 28 [Jatropha curcas]
9 Hb_004466_090 0.1192272477 - - conserved hypothetical protein [Ricinus communis]
10 Hb_000784_060 0.1238256153 - - conserved hypothetical protein [Ricinus communis]
11 Hb_121624_010 0.1292759329 - - PREDICTED: uncharacterized protein LOC105634410 [Jatropha curcas]
12 Hb_002750_040 0.1297644882 - - PREDICTED: probable inactive receptor kinase At5g67200 [Jatropha curcas]
13 Hb_000392_490 0.1300888891 - - PREDICTED: uncharacterized protein LOC105640495 isoform X1 [Jatropha curcas]
14 Hb_000152_570 0.1311326578 - - 21 kDa protein precursor, putative [Ricinus communis]
15 Hb_002518_230 0.1312897029 - - -
16 Hb_001269_660 0.1322372495 - - PREDICTED: protein ASPARTIC PROTEASE IN GUARD CELL 2 [Jatropha curcas]
17 Hb_016277_030 0.134124658 - - hypothetical protein JCGZ_16973 [Jatropha curcas]
18 Hb_002374_510 0.1347147869 - - Esterase precursor, putative [Ricinus communis]
19 Hb_001143_210 0.138815048 - - PREDICTED: E3 ubiquitin ligase BIG BROTHER-related [Jatropha curcas]
20 Hb_006920_020 0.1436822264 - - endo-1,4-beta-glucanase, putative [Ricinus communis]

Gene co-expression network

sample Hb_006992_010 Hb_006992_010 Hb_000963_120 Hb_000963_120 Hb_006992_010--Hb_000963_120 Hb_004374_030 Hb_004374_030 Hb_006992_010--Hb_004374_030 Hb_113766_010 Hb_113766_010 Hb_006992_010--Hb_113766_010 Hb_002391_240 Hb_002391_240 Hb_006992_010--Hb_002391_240 Hb_026198_020 Hb_026198_020 Hb_006992_010--Hb_026198_020 Hb_000309_070 Hb_000309_070 Hb_006992_010--Hb_000309_070 Hb_002119_110 Hb_002119_110 Hb_000963_120--Hb_002119_110 Hb_000963_120--Hb_004374_030 Hb_016277_030 Hb_016277_030 Hb_000963_120--Hb_016277_030 Hb_006916_140 Hb_006916_140 Hb_000963_120--Hb_006916_140 Hb_000963_120--Hb_000309_070 Hb_012239_060 Hb_012239_060 Hb_000963_120--Hb_012239_060 Hb_004374_030--Hb_016277_030 Hb_004466_090 Hb_004466_090 Hb_004374_030--Hb_004466_090 Hb_000784_060 Hb_000784_060 Hb_004374_030--Hb_000784_060 Hb_004374_030--Hb_002119_110 Hb_002095_020 Hb_002095_020 Hb_004374_030--Hb_002095_020 Hb_000103_300 Hb_000103_300 Hb_113766_010--Hb_000103_300 Hb_113766_010--Hb_002391_240 Hb_113766_010--Hb_026198_020 Hb_000152_570 Hb_000152_570 Hb_113766_010--Hb_000152_570 Hb_002284_060 Hb_002284_060 Hb_113766_010--Hb_002284_060 Hb_002750_040 Hb_002750_040 Hb_113766_010--Hb_002750_040 Hb_000193_070 Hb_000193_070 Hb_002391_240--Hb_000193_070 Hb_002391_240--Hb_000103_300 Hb_002391_240--Hb_000152_570 Hb_002391_240--Hb_002284_060 Hb_007370_010 Hb_007370_010 Hb_002391_240--Hb_007370_010 Hb_026198_020--Hb_002750_040 Hb_026198_020--Hb_002391_240 Hb_090390_010 Hb_090390_010 Hb_026198_020--Hb_090390_010 Hb_000392_490 Hb_000392_490 Hb_026198_020--Hb_000392_490 Hb_000309_070--Hb_000392_490 Hb_000309_070--Hb_004374_030 Hb_000309_070--Hb_002119_110 Hb_002374_510 Hb_002374_510 Hb_000309_070--Hb_002374_510
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.386584 0.788811 3.47813 0.11939 0.0368416
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 1.01885 3.52245

CAGE analysis