Hb_007002_020

Information

Type -
Description -
Location Contig7002: 21723-25639
Sequence    

Annotation

kegg
ID rcu:RCOM_1347470
description triacylglycerol lipase, putative
nr
ID XP_012082872.1
description PREDICTED: uncharacterized protein LOC105642604 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067JZQ1
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_14009 PE=4 SV=1
Gene Ontology
ID GO:0006629
description alpha beta-hydrolases superfamily protein

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_54808: 21725-25540
cDNA
(Sanger)
(ID:Location)		 028_O02.ab1: 21725-22201

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_007002_020 0.0 - - PREDICTED: uncharacterized protein LOC105642604 [Jatropha curcas]
2 Hb_001287_040 0.0660168475 - - PREDICTED: kinesin-like protein NACK1 [Jatropha curcas]
3 Hb_006132_090 0.0745224427 - - PREDICTED: origin of replication complex subunit 5 isoform X1 [Jatropha curcas]
4 Hb_001900_140 0.0811798705 - - PREDICTED: ATP-dependent Clp protease proteolytic subunit 4, chloroplastic [Jatropha curcas]
5 Hb_000003_780 0.0827594092 - - hexokinase [Manihot esculenta]
6 Hb_000811_070 0.0879874625 - - PREDICTED: uncharacterized protein LOC105650695 [Jatropha curcas]
7 Hb_007975_060 0.0895961689 - - PREDICTED: uncharacterized GPI-anchored protein At1g61900 isoform X2 [Jatropha curcas]
8 Hb_002876_220 0.0905730302 - - PREDICTED: uncharacterized protein LOC105633932 [Jatropha curcas]
9 Hb_008421_020 0.0909350215 - - PREDICTED: uncharacterized protein LOC105635546 isoform X2 [Jatropha curcas]
10 Hb_001587_180 0.0931650915 - - PREDICTED: peptide methionine sulfoxide reductase B5-like [Jatropha curcas]
11 Hb_000487_260 0.0933822849 - - PREDICTED: protein Iojap, chloroplastic [Jatropha curcas]
12 Hb_013405_020 0.0935848965 - - -
13 Hb_003363_070 0.0970675687 - - -
14 Hb_001322_110 0.1020638286 - - conserved hypothetical protein [Ricinus communis]
15 Hb_005167_010 0.102280657 - - PREDICTED: serine/threonine-protein kinase At5g01020 isoform X1 [Jatropha curcas]
16 Hb_000103_530 0.1023862916 - - PREDICTED: uncharacterized protein LOC105632061 [Jatropha curcas]
17 Hb_003728_060 0.1032241513 transcription factor TF Family: FAR1 PREDICTED: protein FAR1-RELATED SEQUENCE 4-like [Jatropha curcas]
18 Hb_007533_040 0.1058266176 - - protein phosphatase 2c, putative [Ricinus communis]
19 Hb_000122_190 0.106927417 - - PREDICTED: biotin carboxyl carrier protein of acetyl-CoA carboxylase, chloroplastic [Jatropha curcas]
20 Hb_000603_230 0.1090987292 - - copper-transporting atpase paa1, putative [Ricinus communis]

Gene co-expression network

sample Hb_007002_020 Hb_007002_020 Hb_001287_040 Hb_001287_040 Hb_007002_020--Hb_001287_040 Hb_006132_090 Hb_006132_090 Hb_007002_020--Hb_006132_090 Hb_001900_140 Hb_001900_140 Hb_007002_020--Hb_001900_140 Hb_000003_780 Hb_000003_780 Hb_007002_020--Hb_000003_780 Hb_000811_070 Hb_000811_070 Hb_007002_020--Hb_000811_070 Hb_007975_060 Hb_007975_060 Hb_007002_020--Hb_007975_060 Hb_001287_040--Hb_006132_090 Hb_001587_180 Hb_001587_180 Hb_001287_040--Hb_001587_180 Hb_003124_150 Hb_003124_150 Hb_001287_040--Hb_003124_150 Hb_001287_040--Hb_000811_070 Hb_001287_040--Hb_001900_140 Hb_005167_010 Hb_005167_010 Hb_006132_090--Hb_005167_010 Hb_006132_090--Hb_001900_140 Hb_003878_090 Hb_003878_090 Hb_006132_090--Hb_003878_090 Hb_002157_120 Hb_002157_120 Hb_006132_090--Hb_002157_120 Hb_003119_060 Hb_003119_060 Hb_006132_090--Hb_003119_060 Hb_001900_140--Hb_001587_180 Hb_007558_090 Hb_007558_090 Hb_001900_140--Hb_007558_090 Hb_003266_030 Hb_003266_030 Hb_001900_140--Hb_003266_030 Hb_007904_230 Hb_007904_230 Hb_001900_140--Hb_007904_230 Hb_005946_040 Hb_005946_040 Hb_001900_140--Hb_005946_040 Hb_002631_240 Hb_002631_240 Hb_000003_780--Hb_002631_240 Hb_000003_780--Hb_005946_040 Hb_002874_180 Hb_002874_180 Hb_000003_780--Hb_002874_180 Hb_000003_780--Hb_001900_140 Hb_000003_780--Hb_001587_180 Hb_006846_150 Hb_006846_150 Hb_000811_070--Hb_006846_150 Hb_008421_020 Hb_008421_020 Hb_000811_070--Hb_008421_020 Hb_000487_260 Hb_000487_260 Hb_000811_070--Hb_000487_260 Hb_000811_070--Hb_007904_230 Hb_006740_030 Hb_006740_030 Hb_000811_070--Hb_006740_030 Hb_000811_070--Hb_005167_010 Hb_004754_050 Hb_004754_050 Hb_007975_060--Hb_004754_050 Hb_000061_180 Hb_000061_180 Hb_007975_060--Hb_000061_180 Hb_007975_060--Hb_002157_120 Hb_013405_020 Hb_013405_020 Hb_007975_060--Hb_013405_020 Hb_133702_010 Hb_133702_010 Hb_007975_060--Hb_133702_010 Hb_000023_260 Hb_000023_260 Hb_007975_060--Hb_000023_260
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
11.6998 8.72219 27.8209 13.8887 8.57279 10.1447
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
15.1798 16.7307 21.1018 7.89626 25.1081

CAGE analysis