Hb_007007_020

Information

Type -
Description -
Location Contig7007: 7739-8080
Sequence    

Annotation

kegg
ID rcu:RCOM_1613510
description hypothetical protein
nr
ID XP_002511780.1
description conserved hypothetical protein [Ricinus communis]
swissprot
ID -
description -
trembl
ID B9RDJ1
description Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1613510 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_007007_020 0.0 - - conserved hypothetical protein [Ricinus communis]
2 Hb_002413_030 0.0593373806 - - sulfate transporter, putative [Ricinus communis]
3 Hb_082733_010 0.0702456979 - - hypothetical protein JCGZ_23600 [Jatropha curcas]
4 Hb_060236_010 0.1115995691 - - hypothetical protein JCGZ_26099 [Jatropha curcas]
5 Hb_006326_020 0.1116128587 - - -
6 Hb_003057_040 0.1118658878 - - PREDICTED: salt stress-induced hydrophobic peptide ESI3 [Vitis vinifera]
7 Hb_001091_010 0.1148064158 - - PREDICTED: putative disease resistance protein RGA4 isoform X2 [Malus domestica]
8 Hb_023714_010 0.1195300022 - - hypothetical protein B456_007G377100 [Gossypium raimondii]
9 Hb_000046_250 0.1213659845 - - conserved hypothetical protein [Ricinus communis]
10 Hb_041063_010 0.1280621852 - - Disease resistance protein RFL1, putative [Ricinus communis]
11 Hb_017226_020 0.1488712895 transcription factor TF Family: MYB hypothetical protein JCGZ_06720 [Jatropha curcas]
12 Hb_034507_020 0.1489754932 - - PREDICTED: uncharacterized protein LOC105636491 [Jatropha curcas]
13 Hb_000996_090 0.1491729023 transcription factor TF Family: NF-YC ccaat-binding transcription factor, putative [Ricinus communis]
14 Hb_099777_010 0.1507470318 - - PREDICTED: uncharacterized protein LOC104884611 [Beta vulgaris subsp. vulgaris]
15 Hb_005656_020 0.1512159331 - - PREDICTED: uncharacterized protein LOC102707106 [Oryza brachyantha]
16 Hb_001424_050 0.1515098155 - - PREDICTED: zinc finger protein HD1-like isoform X2 [Jatropha curcas]
17 Hb_004634_010 0.1520055702 - - hypothetical protein POPTR_0002s23100g [Populus trichocarpa]
18 Hb_007017_130 0.1524396038 - - PREDICTED: glycerol-3-phosphate 2-O-acyltransferase 6-like isoform X1 [Populus euphratica]
19 Hb_001975_170 0.1525965276 - - PREDICTED: vacuolar protein sorting-associated protein 26A [Nelumbo nucifera]
20 Hb_175976_020 0.1528286243 - - PREDICTED: testis-expressed sequence 10 protein isoform X2 [Jatropha curcas]

Gene co-expression network

sample Hb_007007_020 Hb_007007_020 Hb_002413_030 Hb_002413_030 Hb_007007_020--Hb_002413_030 Hb_082733_010 Hb_082733_010 Hb_007007_020--Hb_082733_010 Hb_060236_010 Hb_060236_010 Hb_007007_020--Hb_060236_010 Hb_006326_020 Hb_006326_020 Hb_007007_020--Hb_006326_020 Hb_003057_040 Hb_003057_040 Hb_007007_020--Hb_003057_040 Hb_001091_010 Hb_001091_010 Hb_007007_020--Hb_001091_010 Hb_002413_030--Hb_082733_010 Hb_000046_250 Hb_000046_250 Hb_002413_030--Hb_000046_250 Hb_023714_010 Hb_023714_010 Hb_002413_030--Hb_023714_010 Hb_041063_010 Hb_041063_010 Hb_002413_030--Hb_041063_010 Hb_002413_030--Hb_003057_040 Hb_082733_010--Hb_060236_010 Hb_059226_020 Hb_059226_020 Hb_082733_010--Hb_059226_020 Hb_082733_010--Hb_041063_010 Hb_082733_010--Hb_001091_010 Hb_004241_050 Hb_004241_050 Hb_060236_010--Hb_004241_050 Hb_000563_620 Hb_000563_620 Hb_060236_010--Hb_000563_620 Hb_060236_010--Hb_041063_010 Hb_002054_090 Hb_002054_090 Hb_060236_010--Hb_002054_090 Hb_001975_170 Hb_001975_170 Hb_006326_020--Hb_001975_170 Hb_007017_130 Hb_007017_130 Hb_006326_020--Hb_007017_130 Hb_004634_010 Hb_004634_010 Hb_006326_020--Hb_004634_010 Hb_099777_010 Hb_099777_010 Hb_006326_020--Hb_099777_010 Hb_000967_070 Hb_000967_070 Hb_006326_020--Hb_000967_070 Hb_003057_040--Hb_023714_010 Hb_006275_040 Hb_006275_040 Hb_003057_040--Hb_006275_040 Hb_001300_060 Hb_001300_060 Hb_003057_040--Hb_001300_060 Hb_005144_140 Hb_005144_140 Hb_003057_040--Hb_005144_140 Hb_000421_150 Hb_000421_150 Hb_001091_010--Hb_000421_150 Hb_007101_240 Hb_007101_240 Hb_001091_010--Hb_007101_240 Hb_010681_020 Hb_010681_020 Hb_001091_010--Hb_010681_020 Hb_000483_290 Hb_000483_290 Hb_001091_010--Hb_000483_290
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.483289 0.480706 15.5108 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 5.7971 0

CAGE analysis