Hb_007017_020

Information

Type -
Description -
Location Contig7017: 20224-20556
Sequence    

Annotation

kegg
ID rcu:RCOM_0699440
description hypothetical protein
nr
ID KDP21269.1
description hypothetical protein JCGZ_21740 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067JP28
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21740 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_007017_020 0.0 - - hypothetical protein JCGZ_21740 [Jatropha curcas]
2 Hb_000731_250 0.2215882386 - - -
3 Hb_000316_020 0.2589043438 - - protein binding protein, putative [Ricinus communis]
4 Hb_000032_480 0.2643910139 - - hypothetical protein glysoja_043543 [Glycine soja]
5 Hb_001780_140 0.2741745311 - - Uncharacterized protein isoform 1 [Theobroma cacao]
6 Hb_002522_020 0.2761963683 - - hypothetical protein B456_011G148700, partial [Gossypium raimondii]
7 Hb_001842_130 0.277076878 - - conserved hypothetical protein [Ricinus communis]
8 Hb_069251_010 0.2796809324 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC104235718, partial [Nicotiana sylvestris]
9 Hb_003754_080 0.2956184758 - - PREDICTED: uncharacterized protein LOC105634374 [Jatropha curcas]
10 Hb_003599_070 0.2972242195 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
11 Hb_000988_040 0.299170936 - - -
12 Hb_001114_340 0.3043272892 - - hypothetical protein JCGZ_13805 [Jatropha curcas]
13 Hb_000504_130 0.3064200498 - - GPI transamidase component family protein [Populus trichocarpa]
14 Hb_000771_130 0.306915209 - - trehalose-6-phosphate synthase, putative [Ricinus communis]
15 Hb_001780_120 0.3083780648 - - PREDICTED: uncharacterized protein LOC105634429 [Jatropha curcas]
16 Hb_000784_040 0.3089958052 - - hypothetical protein POPTR_0013s11550g [Populus trichocarpa]
17 Hb_002073_120 0.3097671165 - - Adenine nucleotide alpha hydrolases-like superfamily protein [Theobroma cacao]
18 Hb_029866_030 0.3122505441 - - hypothetical protein CICLE_v10006898mg [Citrus clementina]
19 Hb_080653_010 0.3151439685 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
20 Hb_000995_070 0.3161219399 - - PREDICTED: secoisolariciresinol dehydrogenase-like [Jatropha curcas]

Gene co-expression network

sample Hb_007017_020 Hb_007017_020 Hb_000731_250 Hb_000731_250 Hb_007017_020--Hb_000731_250 Hb_000316_020 Hb_000316_020 Hb_007017_020--Hb_000316_020 Hb_000032_480 Hb_000032_480 Hb_007017_020--Hb_000032_480 Hb_001780_140 Hb_001780_140 Hb_007017_020--Hb_001780_140 Hb_002522_020 Hb_002522_020 Hb_007017_020--Hb_002522_020 Hb_001842_130 Hb_001842_130 Hb_007017_020--Hb_001842_130 Hb_007576_030 Hb_007576_030 Hb_000731_250--Hb_007576_030 Hb_000906_130 Hb_000906_130 Hb_000731_250--Hb_000906_130 Hb_000731_250--Hb_000316_020 Hb_005224_030 Hb_005224_030 Hb_000731_250--Hb_005224_030 Hb_003124_060 Hb_003124_060 Hb_000731_250--Hb_003124_060 Hb_000161_150 Hb_000161_150 Hb_000316_020--Hb_000161_150 Hb_009314_010 Hb_009314_010 Hb_000316_020--Hb_009314_010 Hb_000771_130 Hb_000771_130 Hb_000316_020--Hb_000771_130 Hb_000432_050 Hb_000432_050 Hb_000316_020--Hb_000432_050 Hb_003754_080 Hb_003754_080 Hb_000316_020--Hb_003754_080 Hb_001538_140 Hb_001538_140 Hb_000316_020--Hb_001538_140 Hb_000504_130 Hb_000504_130 Hb_000032_480--Hb_000504_130 Hb_016482_010 Hb_016482_010 Hb_000032_480--Hb_016482_010 Hb_119504_010 Hb_119504_010 Hb_000032_480--Hb_119504_010 Hb_039262_010 Hb_039262_010 Hb_000032_480--Hb_039262_010 Hb_002360_020 Hb_002360_020 Hb_000032_480--Hb_002360_020 Hb_012053_060 Hb_012053_060 Hb_001780_140--Hb_012053_060 Hb_000084_320 Hb_000084_320 Hb_001780_140--Hb_000084_320 Hb_005054_270 Hb_005054_270 Hb_001780_140--Hb_005054_270 Hb_001780_140--Hb_000771_130 Hb_012053_040 Hb_012053_040 Hb_001780_140--Hb_012053_040 Hb_000479_080 Hb_000479_080 Hb_001780_140--Hb_000479_080 Hb_088538_020 Hb_088538_020 Hb_002522_020--Hb_088538_020 Hb_001114_340 Hb_001114_340 Hb_002522_020--Hb_001114_340 Hb_010417_010 Hb_010417_010 Hb_002522_020--Hb_010417_010 Hb_000141_240 Hb_000141_240 Hb_002522_020--Hb_000141_240 Hb_002073_120 Hb_002073_120 Hb_002522_020--Hb_002073_120 Hb_000172_570 Hb_000172_570 Hb_002522_020--Hb_000172_570 Hb_179520_010 Hb_179520_010 Hb_001842_130--Hb_179520_010 Hb_108528_010 Hb_108528_010 Hb_001842_130--Hb_108528_010 Hb_064885_080 Hb_064885_080 Hb_001842_130--Hb_064885_080 Hb_010174_070 Hb_010174_070 Hb_001842_130--Hb_010174_070 Hb_009644_040 Hb_009644_040 Hb_001842_130--Hb_009644_040 Hb_004064_020 Hb_004064_020 Hb_001842_130--Hb_004064_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0 0 0.480612 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.583554 0.688258 2.74411 0.828613 0.37435

CAGE analysis