Hb_007017_120

Information

Type -
Description -
Location Contig7017: 128837-134652
Sequence    

Annotation

kegg
ID rcu:RCOM_0699170
description protein with unknown function
nr
ID XP_012091983.1
description PREDICTED: exocyst complex component EXO84A [Jatropha curcas]
swissprot
ID F4I4B6
description Exocyst complex component EXO84A OS=Arabidopsis thaliana GN=EXO84A PE=3 SV=1
trembl
ID A0A067JBS0
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21727 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_007017_120 0.0 - - PREDICTED: exocyst complex component EXO84A [Jatropha curcas]
2 Hb_008418_010 0.0977734646 transcription factor TF Family: bHLH PREDICTED: transcription factor bHLH93-like [Jatropha curcas]
3 Hb_002809_020 0.0977792966 - - PREDICTED: leucoanthocyanidin dioxygenase [Jatropha curcas]
4 Hb_178252_010 0.1104296869 - - hypothetical protein POPTR_0018s01890g [Populus trichocarpa]
5 Hb_003768_100 0.1129104901 - - hypothetical protein JCGZ_19930 [Jatropha curcas]
6 Hb_000723_240 0.1167935776 - - phenylalanine ammonia-lyase 2 [Manihot esculenta]
7 Hb_003166_020 0.1260480638 - - PREDICTED: RNA-binding E3 ubiquitin-protein ligase MEX3C-like [Jatropha curcas]
8 Hb_001922_010 0.1274538461 - - PREDICTED: ABC transporter G family member 8 [Jatropha curcas]
9 Hb_000075_030 0.1280431923 - - PREDICTED: aldo-keto reductase family 4 member C10-like [Fragaria vesca subsp. vesca]
10 Hb_028927_010 0.1291495865 - - leucine-rich repeat protein, putative [Ricinus communis]
11 Hb_001102_060 0.132501746 - - PREDICTED: receptor-like serine/threonine-protein kinase At1g78530 isoform X1 [Jatropha curcas]
12 Hb_003160_050 0.1338592004 - - chloroplast-targeted copper chaperone, putative [Ricinus communis]
13 Hb_005503_010 0.1424581891 - - PREDICTED: probable protein Pop3 [Jatropha curcas]
14 Hb_003226_050 0.1442190146 - - Pectinesterase-3 precursor, putative [Ricinus communis]
15 Hb_000364_130 0.1454632601 - - unnamed protein product [Vitis vinifera]
16 Hb_032621_010 0.1456550401 - - hypothetical protein PHAVU_006G197300g [Phaseolus vulgaris]
17 Hb_018591_010 0.1470950868 - - kinase, putative [Ricinus communis]
18 Hb_098030_010 0.1483455362 - - hypothetical protein JCGZ_06251 [Jatropha curcas]
19 Hb_000917_330 0.1530185158 - - PREDICTED: leucoanthocyanidin reductase-like [Jatropha curcas]
20 Hb_164283_010 0.1535839412 - - hypothetical protein RCOM_0725500 [Ricinus communis]

Gene co-expression network

sample Hb_007017_120 Hb_007017_120 Hb_008418_010 Hb_008418_010 Hb_007017_120--Hb_008418_010 Hb_002809_020 Hb_002809_020 Hb_007017_120--Hb_002809_020 Hb_178252_010 Hb_178252_010 Hb_007017_120--Hb_178252_010 Hb_003768_100 Hb_003768_100 Hb_007017_120--Hb_003768_100 Hb_000723_240 Hb_000723_240 Hb_007017_120--Hb_000723_240 Hb_003166_020 Hb_003166_020 Hb_007017_120--Hb_003166_020 Hb_164283_010 Hb_164283_010 Hb_008418_010--Hb_164283_010 Hb_018591_010 Hb_018591_010 Hb_008418_010--Hb_018591_010 Hb_006637_040 Hb_006637_040 Hb_008418_010--Hb_006637_040 Hb_008418_010--Hb_000723_240 Hb_001922_010 Hb_001922_010 Hb_008418_010--Hb_001922_010 Hb_008418_010--Hb_003768_100 Hb_002809_020--Hb_178252_010 Hb_098030_010 Hb_098030_010 Hb_002809_020--Hb_098030_010 Hb_055154_010 Hb_055154_010 Hb_002809_020--Hb_055154_010 Hb_002809_020--Hb_003166_020 Hb_002809_020--Hb_008418_010 Hb_001102_060 Hb_001102_060 Hb_178252_010--Hb_001102_060 Hb_027242_010 Hb_027242_010 Hb_178252_010--Hb_027242_010 Hb_178252_010--Hb_055154_010 Hb_003480_010 Hb_003480_010 Hb_178252_010--Hb_003480_010 Hb_003768_100--Hb_000723_240 Hb_003160_050 Hb_003160_050 Hb_003768_100--Hb_003160_050 Hb_007313_010 Hb_007313_010 Hb_003768_100--Hb_007313_010 Hb_003226_050 Hb_003226_050 Hb_003768_100--Hb_003226_050 Hb_000723_240--Hb_003160_050 Hb_000834_210 Hb_000834_210 Hb_000723_240--Hb_000834_210 Hb_000723_240--Hb_007313_010 Hb_000723_240--Hb_001922_010 Hb_000589_100 Hb_000589_100 Hb_000723_240--Hb_000589_100 Hb_032621_010 Hb_032621_010 Hb_003166_020--Hb_032621_010 Hb_000917_330 Hb_000917_330 Hb_003166_020--Hb_000917_330 Hb_026650_010 Hb_026650_010 Hb_003166_020--Hb_026650_010 Hb_000800_060 Hb_000800_060 Hb_003166_020--Hb_000800_060 Hb_000668_070 Hb_000668_070 Hb_003166_020--Hb_000668_070 Hb_069151_010 Hb_069151_010 Hb_003166_020--Hb_069151_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.00706233 0.110667 0.131469 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.407478 0.032464

CAGE analysis