Hb_007120_120

Information

Type -
Description -
Location Contig7120: 124332-126218
Sequence    

Annotation

kegg
ID rcu:RCOM_0469800
description protein binding protein, putative
nr
ID XP_002531610.1
description protein binding protein, putative [Ricinus communis]
swissprot
ID Q9LZD3
description Exocyst complex component EXO70A1 OS=Arabidopsis thaliana GN=EXO70A1 PE=1 SV=1
trembl
ID B9T041
description Protein binding protein, putative OS=Ricinus communis GN=RCOM_0469800 PE=4 SV=1
Gene Ontology
ID GO:0000145
description exocyst complex component exo70a1-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_007120_120 0.0 - - protein binding protein, putative [Ricinus communis]
2 Hb_009663_020 0.0189763172 - - -
3 Hb_024071_030 0.0476727612 - - hypothetical protein CICLE_v10025479mg [Citrus clementina]
4 Hb_016734_100 0.0497865315 - - -
5 Hb_001652_100 0.051203341 - - PREDICTED: putative amidase C869.01 [Jatropha curcas]
6 Hb_163566_010 0.0669543537 - - PREDICTED: peptidyl-prolyl cis-trans isomerase FKBP17-1, chloroplastic isoform X2 [Amborella trichopoda]
7 Hb_001642_020 0.0697476285 - - PREDICTED: probable cinnamyl alcohol dehydrogenase 9 [Jatropha curcas]
8 Hb_000556_060 0.0699818069 - - hypothetical protein OsJ_28181 [Oryza sativa Japonica Group]
9 Hb_001426_020 0.0756717535 - - hypothetical protein CICLE_v10033594mg, partial [Citrus clementina]
10 Hb_006711_030 0.0762738016 - - PREDICTED: rho guanine nucleotide exchange factor 8-like [Jatropha curcas]
11 Hb_000321_110 0.0767623147 - - Uncharacterized protein TCM_041937 [Theobroma cacao]
12 Hb_000487_080 0.0777698248 - - PREDICTED: probable potassium transporter 13 [Jatropha curcas]
13 Hb_008021_060 0.0788927161 - - Squalene monooxygenase, putative [Ricinus communis]
14 Hb_132840_190 0.0791765639 - - PREDICTED: protein IQ-DOMAIN 1-like isoform X1 [Jatropha curcas]
15 Hb_001031_140 0.0816426403 - - PREDICTED: GDSL esterase/lipase At5g33370-like [Jatropha curcas]
16 Hb_000058_180 0.0820260316 - - PREDICTED: protein ECERIFERUM 3 [Jatropha curcas]
17 Hb_009847_010 0.0844072754 - - PREDICTED: uncharacterized protein LOC105641219 [Jatropha curcas]
18 Hb_007922_030 0.0866891632 - - PREDICTED: uncharacterized protein LOC105111213 [Populus euphratica]
19 Hb_031022_030 0.0884998864 transcription factor TF Family: NAC PREDICTED: NAC domain-containing protein 7-like [Jatropha curcas]
20 Hb_167188_020 0.0900234135 - - PREDICTED: uncharacterized protein At1g05835 [Jatropha curcas]

Gene co-expression network

sample Hb_007120_120 Hb_007120_120 Hb_009663_020 Hb_009663_020 Hb_007120_120--Hb_009663_020 Hb_024071_030 Hb_024071_030 Hb_007120_120--Hb_024071_030 Hb_016734_100 Hb_016734_100 Hb_007120_120--Hb_016734_100 Hb_001652_100 Hb_001652_100 Hb_007120_120--Hb_001652_100 Hb_163566_010 Hb_163566_010 Hb_007120_120--Hb_163566_010 Hb_001642_020 Hb_001642_020 Hb_007120_120--Hb_001642_020 Hb_009663_020--Hb_024071_030 Hb_009663_020--Hb_163566_010 Hb_009663_020--Hb_016734_100 Hb_009663_020--Hb_001652_100 Hb_000321_110 Hb_000321_110 Hb_009663_020--Hb_000321_110 Hb_000556_060 Hb_000556_060 Hb_024071_030--Hb_000556_060 Hb_024071_030--Hb_163566_010 Hb_024071_030--Hb_000321_110 Hb_009847_010 Hb_009847_010 Hb_024071_030--Hb_009847_010 Hb_001426_020 Hb_001426_020 Hb_016734_100--Hb_001426_020 Hb_000487_080 Hb_000487_080 Hb_016734_100--Hb_000487_080 Hb_016734_100--Hb_001642_020 Hb_001031_140 Hb_001031_140 Hb_016734_100--Hb_001031_140 Hb_008021_060 Hb_008021_060 Hb_001652_100--Hb_008021_060 Hb_007922_030 Hb_007922_030 Hb_001652_100--Hb_007922_030 Hb_000058_180 Hb_000058_180 Hb_001652_100--Hb_000058_180 Hb_001652_100--Hb_016734_100 Hb_005833_010 Hb_005833_010 Hb_163566_010--Hb_005833_010 Hb_163566_010--Hb_016734_100 Hb_163566_010--Hb_001426_020 Hb_163566_010--Hb_000487_080 Hb_001642_020--Hb_001031_140 Hb_001642_020--Hb_001426_020 Hb_001642_020--Hb_000487_080 Hb_001141_180 Hb_001141_180 Hb_001642_020--Hb_001141_180 Hb_001642_020--Hb_001652_100
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.0650253 0.0491345 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0.0399655

CAGE analysis