Hb_007123_020

Information

Type transcription factor
Description TF Family: HB
Location Contig7123: 68739-71817
Sequence    

Annotation

kegg
ID rcu:RCOM_0843040
description homeobox protein, putative
nr
ID XP_012072213.1
description PREDICTED: homeobox-leucine zipper protein HOX3 [Jatropha curcas]
swissprot
ID Q0JKX1
description Homeobox-leucine zipper protein HOX3 OS=Oryza sativa subsp. japonica GN=HOX3 PE=1 SV=1
trembl
ID A0A067L0M8
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_04693 PE=4 SV=1
Gene Ontology
ID GO:0003700
description homeobox-leucine zipper protein hox3

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_55352: 68591-71807
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_007123_020 0.0 transcription factor TF Family: HB PREDICTED: homeobox-leucine zipper protein HOX3 [Jatropha curcas]
2 Hb_001329_110 0.0941039555 - - PREDICTED: uncharacterized protein LOC105642675 [Jatropha curcas]
3 Hb_175758_010 0.0985522553 - - PREDICTED: aspartic proteinase A1-like isoform X2 [Jatropha curcas]
4 Hb_000011_120 0.1009799405 - - PREDICTED: ATPase 10, plasma membrane-type-like [Populus euphratica]
5 Hb_002490_090 0.1141540933 - - PREDICTED: uncharacterized protein LOC105133003 [Populus euphratica]
6 Hb_001421_010 0.1151985019 transcription factor TF Family: ARR-B PREDICTED: two-component response regulator-like APRR2 isoform X1 [Jatropha curcas]
7 Hb_006711_020 0.1167843002 - - hypothetical protein JCGZ_07258 [Jatropha curcas]
8 Hb_003788_010 0.1175338397 - - PREDICTED: receptor-like protein kinase HSL1 [Jatropha curcas]
9 Hb_010519_020 0.1183912217 - - hypothetical protein JCGZ_19028 [Jatropha curcas]
10 Hb_000934_290 0.1190583601 - - conserved hypothetical protein [Ricinus communis]
11 Hb_005211_090 0.1199176268 - - PREDICTED: aluminum-activated malate transporter 4-like isoform X1 [Jatropha curcas]
12 Hb_000236_050 0.1214102141 - - phosphate transporter [Manihot esculenta]
13 Hb_006120_030 0.1214367738 - - -
14 Hb_000335_050 0.1244761936 - - PREDICTED: CASP-like protein 4A1 isoform X1 [Jatropha curcas]
15 Hb_005237_040 0.1249904354 - - PREDICTED: uncharacterized protein LOC105630923 [Jatropha curcas]
16 Hb_009785_010 0.1257412056 - - PREDICTED: uncharacterized protein LOC105648749 [Jatropha curcas]
17 Hb_182021_010 0.1260230004 - - sucrose transporter 4 [Hevea brasiliensis]
18 Hb_010926_010 0.1263238977 - - PREDICTED: zinc-metallopeptidase, peroxisomal-like [Jatropha curcas]
19 Hb_002391_350 0.1283466322 - - PREDICTED: uncharacterized protein LOC105647080 [Jatropha curcas]
20 Hb_000963_010 0.1296989185 - - PREDICTED: aquaporin PIP2-4 [Jatropha curcas]

Gene co-expression network

sample Hb_007123_020 Hb_007123_020 Hb_001329_110 Hb_001329_110 Hb_007123_020--Hb_001329_110 Hb_175758_010 Hb_175758_010 Hb_007123_020--Hb_175758_010 Hb_000011_120 Hb_000011_120 Hb_007123_020--Hb_000011_120 Hb_002490_090 Hb_002490_090 Hb_007123_020--Hb_002490_090 Hb_001421_010 Hb_001421_010 Hb_007123_020--Hb_001421_010 Hb_006711_020 Hb_006711_020 Hb_007123_020--Hb_006711_020 Hb_001329_110--Hb_175758_010 Hb_001329_110--Hb_000011_120 Hb_001318_120 Hb_001318_120 Hb_001329_110--Hb_001318_120 Hb_000840_050 Hb_000840_050 Hb_001329_110--Hb_000840_050 Hb_010519_020 Hb_010519_020 Hb_001329_110--Hb_010519_020 Hb_001329_110--Hb_001421_010 Hb_175758_010--Hb_001421_010 Hb_175758_010--Hb_010519_020 Hb_175758_010--Hb_000011_120 Hb_175758_010--Hb_001318_120 Hb_175758_010--Hb_000840_050 Hb_009627_040 Hb_009627_040 Hb_000011_120--Hb_009627_040 Hb_005211_090 Hb_005211_090 Hb_000011_120--Hb_005211_090 Hb_010839_010 Hb_010839_010 Hb_000011_120--Hb_010839_010 Hb_000011_120--Hb_001318_120 Hb_172633_020 Hb_172633_020 Hb_002490_090--Hb_172633_020 Hb_006120_030 Hb_006120_030 Hb_002490_090--Hb_006120_030 Hb_184942_010 Hb_184942_010 Hb_002490_090--Hb_184942_010 Hb_000917_120 Hb_000917_120 Hb_002490_090--Hb_000917_120 Hb_150084_010 Hb_150084_010 Hb_002490_090--Hb_150084_010 Hb_001421_010--Hb_010519_020 Hb_000403_110 Hb_000403_110 Hb_001421_010--Hb_000403_110 Hb_011472_020 Hb_011472_020 Hb_001421_010--Hb_011472_020 Hb_008783_020 Hb_008783_020 Hb_001421_010--Hb_008783_020 Hb_006711_020--Hb_010519_020 Hb_005237_040 Hb_005237_040 Hb_006711_020--Hb_005237_040 Hb_009785_010 Hb_009785_010 Hb_006711_020--Hb_009785_010 Hb_002391_350 Hb_002391_350 Hb_006711_020--Hb_002391_350 Hb_002686_390 Hb_002686_390 Hb_006711_020--Hb_002686_390 Hb_004884_200 Hb_004884_200 Hb_006711_020--Hb_004884_200
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 2.17072 0.763869 1.85958 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0.0979515 4.30492 1.08685

CAGE analysis