Hb_007127_010

Information

Type -
Description -
Location Contig7127: 4968-5388
Sequence    

Annotation

kegg
ID egr:104456016
description uncharacterized LOC104456016
nr
ID XP_012066508.1
description PREDICTED: uncharacterized protein LOC105629509 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067L2Z2
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_23702 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_55380: 5023-5538
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_007127_010 0.0 - - PREDICTED: uncharacterized protein LOC105629509 [Jatropha curcas]
2 Hb_116436_010 0.1342273244 - - PREDICTED: uncharacterized protein LOC105766967 [Gossypium raimondii]
3 Hb_033225_020 0.2021944148 - - conserved hypothetical protein [Ricinus communis]
4 Hb_000008_050 0.2038803061 - - Phenylalanine ammonia-lyase, putative [Ricinus communis]
5 Hb_002900_060 0.2067171747 - - CI small heat shock protein 2 [Prunus salicina]
6 Hb_059126_010 0.2067805025 - - -
7 Hb_002890_190 0.2246612131 - - PREDICTED: 22.0 kDa class IV heat shock protein-like [Jatropha curcas]
8 Hb_000107_130 0.2273022115 - - multicopper oxidase, putative [Ricinus communis]
9 Hb_002232_200 0.2273931987 - - PREDICTED: sugar carrier protein C-like [Jatropha curcas]
10 Hb_000362_240 0.2289700348 - - conserved hypothetical protein [Ricinus communis]
11 Hb_000005_040 0.2360776189 - - PREDICTED: histone H2B.2 [Jatropha curcas]
12 Hb_002983_100 0.2399134768 transcription factor TF Family: ERF PREDICTED: ethylene-responsive transcription factor ERF084 [Jatropha curcas]
13 Hb_005730_080 0.2487890762 - - PREDICTED: 17.6 kDa class I heat shock protein-like [Solanum lycopersicum]
14 Hb_002595_100 0.2494555118 - - heat-shock protein, putative [Ricinus communis]
15 Hb_092043_020 0.2528362379 - - PREDICTED: uncharacterized protein LOC105629509 [Jatropha curcas]
16 Hb_002073_070 0.256024006 - - PREDICTED: 17.3 kDa class I heat shock protein-like [Jatropha curcas]
17 Hb_007382_020 0.2604476019 - - PREDICTED: BAG family molecular chaperone regulator 6-like [Jatropha curcas]
18 Hb_168978_040 0.2608284233 - - PREDICTED: putative pentatricopeptide repeat-containing protein At5g52630 [Jatropha curcas]
19 Hb_001104_040 0.2614809925 - - PREDICTED: uncharacterized protein LOC105629509 [Jatropha curcas]
20 Hb_000479_120 0.2627244619 transcription factor TF Family: FAR1 FAR1-related sequence 5 [Theobroma cacao]

Gene co-expression network

sample Hb_007127_010 Hb_007127_010 Hb_116436_010 Hb_116436_010 Hb_007127_010--Hb_116436_010 Hb_033225_020 Hb_033225_020 Hb_007127_010--Hb_033225_020 Hb_000008_050 Hb_000008_050 Hb_007127_010--Hb_000008_050 Hb_002900_060 Hb_002900_060 Hb_007127_010--Hb_002900_060 Hb_059126_010 Hb_059126_010 Hb_007127_010--Hb_059126_010 Hb_002890_190 Hb_002890_190 Hb_007127_010--Hb_002890_190 Hb_000107_130 Hb_000107_130 Hb_116436_010--Hb_000107_130 Hb_116436_010--Hb_002890_190 Hb_001104_040 Hb_001104_040 Hb_116436_010--Hb_001104_040 Hb_092043_020 Hb_092043_020 Hb_116436_010--Hb_092043_020 Hb_116436_010--Hb_002900_060 Hb_033225_020--Hb_059126_010 Hb_029866_010 Hb_029866_010 Hb_033225_020--Hb_029866_010 Hb_001125_030 Hb_001125_030 Hb_033225_020--Hb_001125_030 Hb_013983_010 Hb_013983_010 Hb_033225_020--Hb_013983_010 Hb_001584_230 Hb_001584_230 Hb_033225_020--Hb_001584_230 Hb_002983_100 Hb_002983_100 Hb_033225_020--Hb_002983_100 Hb_001364_020 Hb_001364_020 Hb_000008_050--Hb_001364_020 Hb_000362_240 Hb_000362_240 Hb_000008_050--Hb_000362_240 Hb_005867_010 Hb_005867_010 Hb_000008_050--Hb_005867_010 Hb_000008_050--Hb_059126_010 Hb_000038_160 Hb_000038_160 Hb_000008_050--Hb_000038_160 Hb_140049_070 Hb_140049_070 Hb_000008_050--Hb_140049_070 Hb_000005_040 Hb_000005_040 Hb_002900_060--Hb_000005_040 Hb_002595_100 Hb_002595_100 Hb_002900_060--Hb_002595_100 Hb_002260_190 Hb_002260_190 Hb_002900_060--Hb_002260_190 Hb_002022_050 Hb_002022_050 Hb_002900_060--Hb_002022_050 Hb_002073_070 Hb_002073_070 Hb_002900_060--Hb_002073_070 Hb_002232_200 Hb_002232_200 Hb_002900_060--Hb_002232_200 Hb_059126_010--Hb_001125_030 Hb_059126_010--Hb_029866_010 Hb_059126_010--Hb_013983_010 Hb_059126_010--Hb_002983_100 Hb_005730_100 Hb_005730_100 Hb_002890_190--Hb_005730_100 Hb_000891_080 Hb_000891_080 Hb_002890_190--Hb_000891_080 Hb_029980_010 Hb_029980_010 Hb_002890_190--Hb_029980_010 Hb_007382_020 Hb_007382_020 Hb_002890_190--Hb_007382_020 Hb_002890_190--Hb_000107_130
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
100.731 30.3028 0 0.306248 948.702 46.1508
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0.535521 0 0

CAGE analysis