Hb_007137_020

Information

Type -
Description -
Location Contig7137: 43491-46115
Sequence    

Annotation

kegg
ID rcu:RCOM_0602380
description multicopper oxidase, putative (EC:1.10.3.3)
nr
ID XP_002522339.1
description multicopper oxidase, putative [Ricinus communis]
swissprot
ID Q00624
description L-ascorbate oxidase homolog OS=Brassica napus GN=Bp10 PE=2 SV=1
trembl
ID B9S8M0
description Multicopper oxidase, putative OS=Ricinus communis GN=RCOM_0602380 PE=4 SV=1
Gene Ontology
ID GO:0005507
description l-ascorbate oxidase homolog

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_007137_020 0.0 - - multicopper oxidase, putative [Ricinus communis]
2 Hb_001008_020 0.0992981718 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
3 Hb_056506_010 0.1006798005 - - hypothetical protein POPTR_0001s08730g [Populus trichocarpa]
4 Hb_001989_080 0.1810111699 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
5 Hb_000286_180 0.1817446582 - - PREDICTED: dnaJ homolog subfamily B member 4 [Jatropha curcas]
6 Hb_000392_510 0.1832655975 - - PREDICTED: mitochondrial outer membrane protein porin of 36 kDa-like [Jatropha curcas]
7 Hb_009898_060 0.1878508889 - - hypothetical protein POPTR_0007s09865g [Populus trichocarpa]
8 Hb_105814_020 0.1910394417 - - berberine bridge enzyme [Hevea brasiliensis]
9 Hb_027474_010 0.1934050389 - - PREDICTED: uncharacterized protein LOC105629982 [Jatropha curcas]
10 Hb_000044_050 0.1943106895 - - PREDICTED: amino acid permease 6-like isoform X1 [Jatropha curcas]
11 Hb_000041_160 0.1971552527 - - PREDICTED: uncharacterized protein LOC104907627 [Beta vulgaris subsp. vulgaris]
12 Hb_006501_140 0.1994423576 - - PREDICTED: MATE efflux family protein 9-like [Jatropha curcas]
13 Hb_003176_020 0.2004100505 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase RLK1 [Vitis vinifera]
14 Hb_002973_130 0.2021981905 - - PREDICTED: uncharacterized protein LOC104609908 [Nelumbo nucifera]
15 Hb_004730_010 0.2036703674 transcription factor TF Family: HB PREDICTED: homeobox-leucine zipper protein HAT5 [Jatropha curcas]
16 Hb_011470_010 0.2040858733 - - hypothetical protein CISIN_1g022501mg [Citrus sinensis]
17 Hb_085010_010 0.2043523236 - - PREDICTED: MLO-like protein 3 isoform X2 [Vitis vinifera]
18 Hb_009786_010 0.2124775606 - - Phosphoprotein phosphatase [Theobroma cacao]
19 Hb_008195_020 0.2144897245 - - Vacuolar-processing enzyme precursor [Ricinus communis]
20 Hb_020817_030 0.2171461012 - - PREDICTED: uncharacterized protein LOC105634770 [Jatropha curcas]

Gene co-expression network

sample Hb_007137_020 Hb_007137_020 Hb_001008_020 Hb_001008_020 Hb_007137_020--Hb_001008_020 Hb_056506_010 Hb_056506_010 Hb_007137_020--Hb_056506_010 Hb_001989_080 Hb_001989_080 Hb_007137_020--Hb_001989_080 Hb_000286_180 Hb_000286_180 Hb_007137_020--Hb_000286_180 Hb_000392_510 Hb_000392_510 Hb_007137_020--Hb_000392_510 Hb_009898_060 Hb_009898_060 Hb_007137_020--Hb_009898_060 Hb_001008_020--Hb_056506_010 Hb_085010_010 Hb_085010_010 Hb_001008_020--Hb_085010_010 Hb_000866_390 Hb_000866_390 Hb_001008_020--Hb_000866_390 Hb_003649_030 Hb_003649_030 Hb_001008_020--Hb_003649_030 Hb_000044_050 Hb_000044_050 Hb_001008_020--Hb_000044_050 Hb_056506_010--Hb_009898_060 Hb_056506_010--Hb_003649_030 Hb_000061_110 Hb_000061_110 Hb_056506_010--Hb_000061_110 Hb_056506_010--Hb_000044_050 Hb_027474_010 Hb_027474_010 Hb_001989_080--Hb_027474_010 Hb_004143_140 Hb_004143_140 Hb_001989_080--Hb_004143_140 Hb_001989_080--Hb_000044_050 Hb_001046_040 Hb_001046_040 Hb_001989_080--Hb_001046_040 Hb_030370_070 Hb_030370_070 Hb_001989_080--Hb_030370_070 Hb_044624_010 Hb_044624_010 Hb_001989_080--Hb_044624_010 Hb_003176_020 Hb_003176_020 Hb_000286_180--Hb_003176_020 Hb_005048_080 Hb_005048_080 Hb_000286_180--Hb_005048_080 Hb_000286_180--Hb_000392_510 Hb_000029_180 Hb_000029_180 Hb_000286_180--Hb_000029_180 Hb_003376_150 Hb_003376_150 Hb_000286_180--Hb_003376_150 Hb_002218_060 Hb_002218_060 Hb_000286_180--Hb_002218_060 Hb_001899_040 Hb_001899_040 Hb_000392_510--Hb_001899_040 Hb_000392_510--Hb_002218_060 Hb_000392_510--Hb_009898_060 Hb_000640_280 Hb_000640_280 Hb_000392_510--Hb_000640_280 Hb_009898_060--Hb_000061_110 Hb_009898_060--Hb_003649_030 Hb_009898_060--Hb_001899_040 Hb_002056_140 Hb_002056_140 Hb_009898_060--Hb_002056_140 Hb_000269_040 Hb_000269_040 Hb_009898_060--Hb_000269_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0728815 0 0.0274872 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.00899029 0.0473074

CAGE analysis