Hb_007157_010

Information

Type -
Description -
Location Contig7157: 9350-11277
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_007157_010 0.0 - - -
2 Hb_006452_230 0.192326976 - - PREDICTED: uncharacterized protein LOC105635044 [Jatropha curcas]
3 Hb_172665_010 0.2347235333 - - PREDICTED: uncharacterized protein LOC105636491 [Jatropha curcas]
4 Hb_001519_020 0.2425500952 - - hypothetical protein JCGZ_09913 [Jatropha curcas]
5 Hb_000331_520 0.2574484577 - - Esterase precursor, putative [Ricinus communis]
6 Hb_000837_010 0.2962833426 - - PREDICTED: uncharacterized protein LOC104894399 [Beta vulgaris subsp. vulgaris]
7 Hb_104721_010 0.3046355848 - - PREDICTED: uncharacterized protein LOC105763691 [Gossypium raimondii]
8 Hb_000434_020 0.3087073292 - - PREDICTED: protein yippee-like At5g53940 [Jatropha curcas]
9 Hb_001366_070 0.3127655621 transcription factor TF Family: NAC PREDICTED: NAC domain-containing protein 4-like isoform X2 [Jatropha curcas]
10 Hb_178654_020 0.3146020024 - - PREDICTED: uncharacterized protein LOC105638675 [Jatropha curcas]
11 Hb_000402_100 0.3155784081 - - PREDICTED: L-tryptophan--pyruvate aminotransferase 1 [Jatropha curcas]
12 Hb_156924_020 0.3185106424 - - PREDICTED: uncharacterized protein LOC105644346 [Jatropha curcas]
13 Hb_030131_010 0.3199994197 - - PREDICTED: probable acyl-activating enzyme 1, peroxisomal, partial [Jatropha curcas]
14 Hb_107221_010 0.3257284519 - - DNA/RNA polymerases superfamily protein [Theobroma cacao]
15 Hb_000757_090 0.3283026916 - - SPla/RYanodine receptor domain-containing protein isoform 3 [Theobroma cacao]
16 Hb_076223_010 0.3328045612 - - -
17 Hb_001493_120 0.3361481453 - - -
18 Hb_094852_010 0.3374687213 - - PREDICTED: uncharacterized protein LOC105650298, partial [Jatropha curcas]
19 Hb_001936_170 0.3385657374 - - conserved hypothetical protein [Ricinus communis]
20 Hb_005654_010 0.3395876706 - - DNA/RNA polymerases superfamily protein [Theobroma cacao]

Gene co-expression network

sample Hb_007157_010 Hb_007157_010 Hb_006452_230 Hb_006452_230 Hb_007157_010--Hb_006452_230 Hb_172665_010 Hb_172665_010 Hb_007157_010--Hb_172665_010 Hb_001519_020 Hb_001519_020 Hb_007157_010--Hb_001519_020 Hb_000331_520 Hb_000331_520 Hb_007157_010--Hb_000331_520 Hb_000837_010 Hb_000837_010 Hb_007157_010--Hb_000837_010 Hb_104721_010 Hb_104721_010 Hb_007157_010--Hb_104721_010 Hb_030131_010 Hb_030131_010 Hb_006452_230--Hb_030131_010 Hb_006452_230--Hb_000331_520 Hb_000402_100 Hb_000402_100 Hb_006452_230--Hb_000402_100 Hb_006452_230--Hb_172665_010 Hb_001366_070 Hb_001366_070 Hb_006452_230--Hb_001366_070 Hb_172665_010--Hb_000331_520 Hb_172665_010--Hb_000837_010 Hb_172665_010--Hb_001519_020 Hb_052764_100 Hb_052764_100 Hb_172665_010--Hb_052764_100 Hb_158235_010 Hb_158235_010 Hb_001519_020--Hb_158235_010 Hb_003020_290 Hb_003020_290 Hb_001519_020--Hb_003020_290 Hb_005496_100 Hb_005496_100 Hb_001519_020--Hb_005496_100 Hb_000757_090 Hb_000757_090 Hb_001519_020--Hb_000757_090 Hb_001344_030 Hb_001344_030 Hb_001519_020--Hb_001344_030 Hb_000331_520--Hb_030131_010 Hb_161207_010 Hb_161207_010 Hb_000331_520--Hb_161207_010 Hb_011724_030 Hb_011724_030 Hb_000331_520--Hb_011724_030 Hb_006938_050 Hb_006938_050 Hb_000837_010--Hb_006938_050 Hb_001558_050 Hb_001558_050 Hb_000837_010--Hb_001558_050 Hb_000837_010--Hb_052764_100 Hb_004218_260 Hb_004218_260 Hb_000837_010--Hb_004218_260 Hb_000460_070 Hb_000460_070 Hb_000837_010--Hb_000460_070 Hb_186054_010 Hb_186054_010 Hb_104721_010--Hb_186054_010 Hb_104721_010--Hb_001344_030 Hb_012717_030 Hb_012717_030 Hb_104721_010--Hb_012717_030 Hb_005654_010 Hb_005654_010 Hb_104721_010--Hb_005654_010 Hb_104721_010--Hb_000757_090 Hb_005542_170 Hb_005542_170 Hb_104721_010--Hb_005542_170
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0 0.0492753 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.112089 0.176159 0 0.0362824 0.16846

CAGE analysis