Hb_007161_010

Information

Type transcription factor
Description TF Family: MYB-related
Location Contig7161: 4288-9145
Sequence    

Annotation

kegg
ID rcu:RCOM_0697470
description myb124, putative
nr
ID XP_012067595.1
description PREDICTED: uncharacterized protein LOC105630404 isoform X1 [Jatropha curcas]
swissprot
ID P10244
description Myb-related protein B OS=Homo sapiens GN=MYBL2 PE=1 SV=1
trembl
ID A0A067LAN9
description MYB family protein OS=Jatropha curcas GN=JCGZ_15571 PE=4 SV=1
Gene Ontology
ID GO:0003677
description myb family transcription factor family protein

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_007161_010 0.0 transcription factor TF Family: MYB-related PREDICTED: uncharacterized protein LOC105630404 isoform X1 [Jatropha curcas]
2 Hb_005614_050 0.0796909346 - - PREDICTED: aspartate aminotransferase, mitochondrial-like [Jatropha curcas]
3 Hb_000363_200 0.1047624267 - - 40S ribosomal protein S8, putative [Ricinus communis]
4 Hb_000179_050 0.1129214845 - - 40S ribosomal protein S17A [Hevea brasiliensis]
5 Hb_002078_460 0.11345224 - - -
6 Hb_003551_050 0.1152325786 - - PREDICTED: mitochondrial fission 1 protein A [Jatropha curcas]
7 Hb_000753_130 0.1162376205 - - PREDICTED: uncharacterized protein LOC105640673 [Jatropha curcas]
8 Hb_000671_150 0.1165096095 - - PREDICTED: signal recognition particle 19 kDa protein-like [Jatropha curcas]
9 Hb_006846_110 0.1165118247 - - PREDICTED: pentatricopeptide repeat-containing protein At5g61800 [Jatropha curcas]
10 Hb_006153_120 0.1172320129 - - hypothetical protein JCGZ_20793 [Jatropha curcas]
11 Hb_088202_010 0.1172327087 - - hypothetical protein JCGZ_13241 [Jatropha curcas]
12 Hb_002756_020 0.120156218 transcription factor TF Family: HB bel1 homeotic protein, putative [Ricinus communis]
13 Hb_116898_010 0.12263487 - - PREDICTED: uncharacterized protein LOC105639569 isoform X2 [Jatropha curcas]
14 Hb_131864_040 0.123753942 - - PREDICTED: uncharacterized protein LOC105649406 isoform X1 [Jatropha curcas]
15 Hb_003226_280 0.1239133348 - - PREDICTED: peter Pan-like protein [Populus euphratica]
16 Hb_005694_080 0.1242313724 - - DNA-directed RNA polymerase III, putative [Ricinus communis]
17 Hb_002603_160 0.125160904 - - Arginyl-tRNA--protein transferase, putative [Ricinus communis]
18 Hb_006594_020 0.1253094849 - - PREDICTED: uncharacterized protein LOC105138974 isoform X1 [Populus euphratica]
19 Hb_006816_450 0.1260773023 - - conserved hypothetical protein [Ricinus communis]
20 Hb_007943_090 0.1268771466 - - PREDICTED: probable plastidic glucose transporter 2 [Jatropha curcas]

Gene co-expression network

sample Hb_007161_010 Hb_007161_010 Hb_005614_050 Hb_005614_050 Hb_007161_010--Hb_005614_050 Hb_000363_200 Hb_000363_200 Hb_007161_010--Hb_000363_200 Hb_000179_050 Hb_000179_050 Hb_007161_010--Hb_000179_050 Hb_002078_460 Hb_002078_460 Hb_007161_010--Hb_002078_460 Hb_003551_050 Hb_003551_050 Hb_007161_010--Hb_003551_050 Hb_000753_130 Hb_000753_130 Hb_007161_010--Hb_000753_130 Hb_002756_020 Hb_002756_020 Hb_005614_050--Hb_002756_020 Hb_005614_050--Hb_003551_050 Hb_005614_050--Hb_000363_200 Hb_001538_140 Hb_001538_140 Hb_005614_050--Hb_001538_140 Hb_006594_020 Hb_006594_020 Hb_005614_050--Hb_006594_020 Hb_003226_280 Hb_003226_280 Hb_000363_200--Hb_003226_280 Hb_000865_070 Hb_000865_070 Hb_000363_200--Hb_000865_070 Hb_003097_210 Hb_003097_210 Hb_000363_200--Hb_003097_210 Hb_001545_060 Hb_001545_060 Hb_000363_200--Hb_001545_060 Hb_000363_200--Hb_002078_460 Hb_116898_010 Hb_116898_010 Hb_000363_200--Hb_116898_010 Hb_006153_120 Hb_006153_120 Hb_000179_050--Hb_006153_120 Hb_001856_020 Hb_001856_020 Hb_000179_050--Hb_001856_020 Hb_000196_090 Hb_000196_090 Hb_000179_050--Hb_000196_090 Hb_002849_210 Hb_002849_210 Hb_000179_050--Hb_002849_210 Hb_005147_090 Hb_005147_090 Hb_000179_050--Hb_005147_090 Hb_001616_060 Hb_001616_060 Hb_002078_460--Hb_001616_060 Hb_002028_130 Hb_002028_130 Hb_002078_460--Hb_002028_130 Hb_001278_050 Hb_001278_050 Hb_002078_460--Hb_001278_050 Hb_007382_150 Hb_007382_150 Hb_002078_460--Hb_007382_150 Hb_002078_460--Hb_000865_070 Hb_000032_220 Hb_000032_220 Hb_002078_460--Hb_000032_220 Hb_093458_050 Hb_093458_050 Hb_003551_050--Hb_093458_050 Hb_011953_020 Hb_011953_020 Hb_003551_050--Hb_011953_020 Hb_000976_360 Hb_000976_360 Hb_003551_050--Hb_000976_360 Hb_031862_110 Hb_031862_110 Hb_003551_050--Hb_031862_110 Hb_002603_160 Hb_002603_160 Hb_003551_050--Hb_002603_160 Hb_003551_050--Hb_000753_130 Hb_003408_030 Hb_003408_030 Hb_000753_130--Hb_003408_030 Hb_027402_070 Hb_027402_070 Hb_000753_130--Hb_027402_070 Hb_002527_070 Hb_002527_070 Hb_000753_130--Hb_002527_070 Hb_008289_060 Hb_008289_060 Hb_000753_130--Hb_008289_060 Hb_000431_010 Hb_000431_010 Hb_000753_130--Hb_000431_010 Hb_001141_280 Hb_001141_280 Hb_000753_130--Hb_001141_280
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
10.8668 3.6237 1.2585 3.64074 9.49932 10.8261
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
15.383 24.0424 32.2666 13.9178 1.79036

CAGE analysis