Hb_007192_030

Information

Type -
Description -
Location Contig7192: 9981-13396
Sequence    

Annotation

kegg
ID rcu:RCOM_1508410
description hydrolase, putative
nr
ID XP_012079963.1
description PREDICTED: manganese-dependent ADP-ribose/CDP-alcohol diphosphatase [Jatropha curcas]
swissprot
ID Q8H5F8
description Manganese-dependent ADP-ribose/CDP-alcohol diphosphatase OS=Oryza sativa subsp. japonica GN=Os07g0688000 PE=2 SV=1
trembl
ID A0A067K465
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_11392 PE=4 SV=1
Gene Ontology
ID GO:0047631
description manganese-dependent adp-ribose cdp-alcohol diphosphatase

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_55540: 10063-13301
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_007192_030 0.0 - - PREDICTED: manganese-dependent ADP-ribose/CDP-alcohol diphosphatase [Jatropha curcas]
2 Hb_001369_790 0.0535256329 - - PREDICTED: clp protease-related protein At4g12060, chloroplastic [Jatropha curcas]
3 Hb_000086_080 0.0690798603 - - conserved hypothetical protein [Ricinus communis]
4 Hb_000394_180 0.0697928612 - - PREDICTED: uncharacterized protein LOC105636995 [Jatropha curcas]
5 Hb_000622_290 0.0710673809 - - PREDICTED: F-box/kelch-repeat protein At3g61590 [Jatropha curcas]
6 Hb_007904_230 0.0710988759 - - PREDICTED: D-cysteine desulfhydrase 2, mitochondrial [Jatropha curcas]
7 Hb_004951_060 0.0727241471 - - PREDICTED: uncharacterized protein LOC105634399 [Jatropha curcas]
8 Hb_000107_430 0.0747549908 - - PREDICTED: brefeldin A-inhibited guanine nucleotide-exchange protein 1 [Jatropha curcas]
9 Hb_002762_110 0.0835633016 - - conserved hypothetical protein [Ricinus communis]
10 Hb_005016_040 0.083877852 transcription factor TF Family: E2F-DP PREDICTED: transcription factor-like protein DPB isoform X2 [Jatropha curcas]
11 Hb_000811_070 0.0843848617 - - PREDICTED: uncharacterized protein LOC105650695 [Jatropha curcas]
12 Hb_006846_150 0.0845680642 - - conserved hypothetical protein [Ricinus communis]
13 Hb_003266_030 0.0849673633 - - hypothetical protein POPTR_0002s05550g [Populus trichocarpa]
14 Hb_001277_100 0.0895842677 - - PREDICTED: 2-methyl-6-phytyl-1,4-hydroquinone methyltransferase, chloroplastic-like isoform X1 [Gossypium raimondii]
15 Hb_004965_110 0.0905149505 - - PREDICTED: folylpolyglutamate synthase [Jatropha curcas]
16 Hb_004644_030 0.0928266972 - - PREDICTED: FAD synthase isoform X3 [Jatropha curcas]
17 Hb_003994_160 0.093382672 - - PREDICTED: uncharacterized protein LOC105131691 isoform X5 [Populus euphratica]
18 Hb_002392_010 0.0939118076 - - PREDICTED: apurinic endonuclease-redox protein isoform X4 [Jatropha curcas]
19 Hb_000317_260 0.0939147197 - - unknown [Populus trichocarpa]
20 Hb_008695_200 0.0958215733 - - Protein grpE, putative [Ricinus communis]

Gene co-expression network

sample Hb_007192_030 Hb_007192_030 Hb_001369_790 Hb_001369_790 Hb_007192_030--Hb_001369_790 Hb_000086_080 Hb_000086_080 Hb_007192_030--Hb_000086_080 Hb_000394_180 Hb_000394_180 Hb_007192_030--Hb_000394_180 Hb_000622_290 Hb_000622_290 Hb_007192_030--Hb_000622_290 Hb_007904_230 Hb_007904_230 Hb_007192_030--Hb_007904_230 Hb_004951_060 Hb_004951_060 Hb_007192_030--Hb_004951_060 Hb_004440_060 Hb_004440_060 Hb_001369_790--Hb_004440_060 Hb_000392_550 Hb_000392_550 Hb_001369_790--Hb_000392_550 Hb_001369_790--Hb_000086_080 Hb_001369_790--Hb_000394_180 Hb_001369_790--Hb_000622_290 Hb_073973_090 Hb_073973_090 Hb_000086_080--Hb_073973_090 Hb_003266_030 Hb_003266_030 Hb_000086_080--Hb_003266_030 Hb_011671_260 Hb_011671_260 Hb_000086_080--Hb_011671_260 Hb_000023_360 Hb_000023_360 Hb_000086_080--Hb_000023_360 Hb_003053_110 Hb_003053_110 Hb_000086_080--Hb_003053_110 Hb_000394_180--Hb_004951_060 Hb_001301_340 Hb_001301_340 Hb_000394_180--Hb_001301_340 Hb_006846_150 Hb_006846_150 Hb_000394_180--Hb_006846_150 Hb_004257_010 Hb_004257_010 Hb_000394_180--Hb_004257_010 Hb_002762_110 Hb_002762_110 Hb_000622_290--Hb_002762_110 Hb_004644_030 Hb_004644_030 Hb_000622_290--Hb_004644_030 Hb_001946_380 Hb_001946_380 Hb_000622_290--Hb_001946_380 Hb_000107_430 Hb_000107_430 Hb_000622_290--Hb_000107_430 Hb_000364_050 Hb_000364_050 Hb_007904_230--Hb_000364_050 Hb_007904_230--Hb_003266_030 Hb_000811_070 Hb_000811_070 Hb_007904_230--Hb_000811_070 Hb_000080_130 Hb_000080_130 Hb_007904_230--Hb_000080_130 Hb_049575_010 Hb_049575_010 Hb_007904_230--Hb_049575_010 Hb_062226_060 Hb_062226_060 Hb_004951_060--Hb_062226_060 Hb_001662_130 Hb_001662_130 Hb_004951_060--Hb_001662_130 Hb_000317_260 Hb_000317_260 Hb_004951_060--Hb_000317_260 Hb_004951_060--Hb_006846_150
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
2.21412 2.03262 5.86607 6.89786 1.70418 2.25663
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
3.617 6.47162 4.01867 3.18529 8.3258

CAGE analysis