Hb_007201_010

Information

Type -
Description -
Location Contig7201: 7376-13678
Sequence    

Annotation

kegg
ID pper:PRUPE_ppa006157mg
description hypothetical protein
nr
ID XP_012068659.1
description PREDICTED: uncharacterized protein LOC105631226 isoform X2 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KZV8
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_24532 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_55647: 7388-7939 , PASA_asmbl_55648: 11043-13816
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_007201_010 0.0 - - PREDICTED: uncharacterized protein LOC105631226 isoform X2 [Jatropha curcas]
2 Hb_004374_090 0.1122130226 transcription factor TF Family: HB PREDICTED: homeobox protein BEL1 homolog [Populus euphratica]
3 Hb_003944_010 0.1348887109 - - PREDICTED: receptor-like protein kinase HSL1 [Jatropha curcas]
4 Hb_003905_030 0.1395093738 - - PREDICTED: clustered mitochondria protein homolog [Jatropha curcas]
5 Hb_000360_010 0.1456825068 - - PREDICTED: ferredoxin-dependent glutamate synthase, chloroplastic isoform X1 [Jatropha curcas]
6 Hb_010080_070 0.1509736576 - - PREDICTED: ATP-dependent zinc metalloprotease FTSH, chloroplastic [Jatropha curcas]
7 Hb_001081_050 0.1529273595 - - hypothetical protein POPTR_0001s07860g [Populus trichocarpa]
8 Hb_023738_010 0.1536800917 - - Concanavalin A-like lectin protein kinase family protein [Theobroma cacao]
9 Hb_106552_030 0.1561857974 - - hypothetical protein POPTR_0006s23180g [Populus trichocarpa]
10 Hb_003687_160 0.1570841933 - - Ran GTPase binding protein, putative [Ricinus communis]
11 Hb_156850_020 0.1580755487 - - ATP-dependent zinc metalloprotease FTSH 1, chloroplastic [Glycine soja]
12 Hb_010402_040 0.1584714704 - - hypothetical protein JCGZ_21227 [Jatropha curcas]
13 Hb_168319_040 0.1603298541 - - PREDICTED: cytochrome P450 CYP749A22-like [Jatropha curcas]
14 Hb_003362_050 0.1603332694 - - PREDICTED: probable sucrose-phosphate synthase 3 [Jatropha curcas]
15 Hb_005194_050 0.1613872161 transcription factor TF Family: GRAS SCL domain class transcription factor [Theobroma cacao]
16 Hb_029510_060 0.1653086715 - - PREDICTED: probable plastidic glucose transporter 3 [Jatropha curcas]
17 Hb_034168_010 0.1695656722 - - hypothetical protein [Azospirillum sp. CAG:260]
18 Hb_000139_030 0.1697775591 - - PREDICTED: uncharacterized protein LOC101254423 [Solanum lycopersicum]
19 Hb_000992_090 0.1704281322 transcription factor TF Family: Orphans CIL, putative [Ricinus communis]
20 Hb_000208_220 0.1710631274 - - -

Gene co-expression network

sample Hb_007201_010 Hb_007201_010 Hb_004374_090 Hb_004374_090 Hb_007201_010--Hb_004374_090 Hb_003944_010 Hb_003944_010 Hb_007201_010--Hb_003944_010 Hb_003905_030 Hb_003905_030 Hb_007201_010--Hb_003905_030 Hb_000360_010 Hb_000360_010 Hb_007201_010--Hb_000360_010 Hb_010080_070 Hb_010080_070 Hb_007201_010--Hb_010080_070 Hb_001081_050 Hb_001081_050 Hb_007201_010--Hb_001081_050 Hb_023738_010 Hb_023738_010 Hb_004374_090--Hb_023738_010 Hb_168319_040 Hb_168319_040 Hb_004374_090--Hb_168319_040 Hb_034168_010 Hb_034168_010 Hb_004374_090--Hb_034168_010 Hb_093388_010 Hb_093388_010 Hb_004374_090--Hb_093388_010 Hb_005678_030 Hb_005678_030 Hb_004374_090--Hb_005678_030 Hb_156850_020 Hb_156850_020 Hb_003944_010--Hb_156850_020 Hb_007595_020 Hb_007595_020 Hb_003944_010--Hb_007595_020 Hb_003944_010--Hb_010080_070 Hb_005779_090 Hb_005779_090 Hb_003944_010--Hb_005779_090 Hb_185274_010 Hb_185274_010 Hb_003944_010--Hb_185274_010 Hb_003905_030--Hb_010080_070 Hb_003905_030--Hb_000360_010 Hb_003905_030--Hb_156850_020 Hb_000103_240 Hb_000103_240 Hb_003905_030--Hb_000103_240 Hb_001257_110 Hb_001257_110 Hb_003905_030--Hb_001257_110 Hb_011900_020 Hb_011900_020 Hb_003905_030--Hb_011900_020 Hb_000360_010--Hb_011900_020 Hb_000360_010--Hb_156850_020 Hb_106552_030 Hb_106552_030 Hb_000360_010--Hb_106552_030 Hb_000359_070 Hb_000359_070 Hb_000360_010--Hb_000359_070 Hb_000360_010--Hb_010080_070 Hb_010080_070--Hb_156850_020 Hb_001517_060 Hb_001517_060 Hb_010080_070--Hb_001517_060 Hb_000009_470 Hb_000009_470 Hb_010080_070--Hb_000009_470 Hb_000992_090 Hb_000992_090 Hb_010080_070--Hb_000992_090 Hb_010080_070--Hb_106552_030 Hb_000107_540 Hb_000107_540 Hb_010080_070--Hb_000107_540 Hb_184798_060 Hb_184798_060 Hb_001081_050--Hb_184798_060 Hb_027638_010 Hb_027638_010 Hb_001081_050--Hb_027638_010 Hb_000208_220 Hb_000208_220 Hb_001081_050--Hb_000208_220 Hb_003144_010 Hb_003144_010 Hb_001081_050--Hb_003144_010 Hb_161881_010 Hb_161881_010 Hb_001081_050--Hb_161881_010 Hb_004407_030 Hb_004407_030 Hb_001081_050--Hb_004407_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.515829 6.44095 6.37851 2.68895 0.129884 0.222807
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.61888 0.462547 0.137258 0.738441 49.2149

CAGE analysis