Hb_007210_010

Information

Type -
Description -
Location Contig7210: 4689-4910
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID GO:0016740
description hexaprenyldihydroxybenzoate mitochondrial

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_007210_010 0.0 - - -
2 Hb_003092_010 0.1198397713 - - hypothetical protein POPTR_0025s00750g [Populus trichocarpa]
3 Hb_001628_040 0.1206827329 - - PREDICTED: beta-galactosidase 13-like [Populus euphratica]
4 Hb_001322_200 0.1274160514 - - conserved hypothetical protein [Ricinus communis]
5 Hb_000103_210 0.1277098633 - - PREDICTED: protein lin-12-like isoform X1 [Populus euphratica]
6 Hb_000203_130 0.1282462592 - - -
7 Hb_000645_040 0.1301399758 transcription factor TF Family: GNAT N-acetyltransferase, putative [Ricinus communis]
8 Hb_001817_050 0.1303284843 transcription factor TF Family: C2H2 PREDICTED: transcriptional regulator SUPERMAN [Jatropha curcas]
9 Hb_008535_020 0.130555624 transcription factor TF Family: bHLH basic helix-loop-helix family protein [Populus trichocarpa]
10 Hb_002235_340 0.1309875987 transcription factor TF Family: MYB r2r3-myb transcription factor, putative [Ricinus communis]
11 Hb_153199_010 0.1345404159 - - -
12 Hb_060416_010 0.135266493 - - conserved hypothetical protein [Ricinus communis]
13 Hb_005699_100 0.1377833527 - - hypothetical protein POPTR_0013s12390g [Populus trichocarpa]
14 Hb_007432_040 0.1383704808 transcription factor TF Family: bHLH PREDICTED: transcription factor BEE 3-like [Jatropha curcas]
15 Hb_000027_020 0.1385172953 - - Nonspecific lipid-transfer protein, putative [Ricinus communis]
16 Hb_000002_190 0.1385796255 transcription factor TF Family: ERF Ethylene-responsive transcription factor [Morus notabilis]
17 Hb_000003_520 0.1385796255 - - PREDICTED: cell division cycle protein 27 homolog B [Jatropha curcas]
18 Hb_000005_170 0.1385796255 transcription factor TF Family: bHLH PREDICTED: transcription factor FER-LIKE IRON DEFICIENCY-INDUCED TRANSCRIPTION FACTOR [Jatropha curcas]
19 Hb_000009_230 0.1385796255 - - hypothetical protein POPTR_0007s12290g [Populus trichocarpa]
20 Hb_000011_110 0.1385796255 - - PREDICTED: uncharacterized protein LOC105631299 [Jatropha curcas]

Gene co-expression network

sample Hb_007210_010 Hb_007210_010 Hb_003092_010 Hb_003092_010 Hb_007210_010--Hb_003092_010 Hb_001628_040 Hb_001628_040 Hb_007210_010--Hb_001628_040 Hb_001322_200 Hb_001322_200 Hb_007210_010--Hb_001322_200 Hb_000103_210 Hb_000103_210 Hb_007210_010--Hb_000103_210 Hb_000203_130 Hb_000203_130 Hb_007210_010--Hb_000203_130 Hb_000645_040 Hb_000645_040 Hb_007210_010--Hb_000645_040 Hb_003092_010--Hb_001322_200 Hb_003092_010--Hb_000103_210 Hb_003092_010--Hb_000203_130 Hb_060416_010 Hb_060416_010 Hb_003092_010--Hb_060416_010 Hb_001817_050 Hb_001817_050 Hb_003092_010--Hb_001817_050 Hb_000002_190 Hb_000002_190 Hb_003092_010--Hb_000002_190 Hb_118941_010 Hb_118941_010 Hb_001628_040--Hb_118941_010 Hb_000027_020 Hb_000027_020 Hb_001628_040--Hb_000027_020 Hb_001277_390 Hb_001277_390 Hb_001628_040--Hb_001277_390 Hb_001247_050 Hb_001247_050 Hb_001628_040--Hb_001247_050 Hb_008535_020 Hb_008535_020 Hb_001628_040--Hb_008535_020 Hb_001322_200--Hb_000103_210 Hb_001322_200--Hb_000203_130 Hb_001322_200--Hb_001817_050 Hb_002235_340 Hb_002235_340 Hb_001322_200--Hb_002235_340 Hb_153199_010 Hb_153199_010 Hb_001322_200--Hb_153199_010 Hb_000103_210--Hb_000203_130 Hb_000103_210--Hb_001817_050 Hb_000103_210--Hb_002235_340 Hb_000103_210--Hb_153199_010 Hb_000203_130--Hb_001817_050 Hb_000203_130--Hb_002235_340 Hb_000203_130--Hb_153199_010 Hb_007432_040 Hb_007432_040 Hb_000203_130--Hb_007432_040 Hb_000224_070 Hb_000224_070 Hb_000645_040--Hb_000224_070 Hb_000645_040--Hb_000027_020 Hb_000645_040--Hb_001817_050 Hb_000645_040--Hb_002235_340 Hb_000645_040--Hb_118941_010 Hb_000645_040--Hb_000203_130
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.465714 0 0.598197 98.5681 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.946097 1.51487 0 0.355996 0

CAGE analysis