Hb_007227_030

Information

Type -
Description -
Location Contig7227: 9737-10018
Sequence    

Annotation

kegg
ID rcu:RCOM_0885330
description lipid binding protein, putative
nr
ID KDP40976.1
description hypothetical protein JCGZ_24975 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KXN1
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_24975 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_007227_030 0.0 - - hypothetical protein JCGZ_24975 [Jatropha curcas]
2 Hb_000165_260 0.0598489732 - - PREDICTED: uncharacterized protein LOC105133752 isoform X2 [Populus euphratica]
3 Hb_000328_030 0.0765747223 - - PREDICTED: cellulose synthase A catalytic subunit 7 [UDP-forming] [Jatropha curcas]
4 Hb_002311_010 0.0801832986 - - PREDICTED: chitinase-like protein 2 [Jatropha curcas]
5 Hb_001712_030 0.0820423667 - - PREDICTED: lysine-rich arabinogalactan protein 19 [Jatropha curcas]
6 Hb_003090_190 0.0832841877 - - PREDICTED: 17.3 kDa class I heat shock protein-like [Nelumbo nucifera]
7 Hb_001366_360 0.0834016187 - - catalytic, putative [Ricinus communis]
8 Hb_001377_220 0.088787561 - - dopamine beta-monooxygenase, putative [Ricinus communis]
9 Hb_000462_040 0.0899624157 - - ATSMC2, putative [Ricinus communis]
10 Hb_001377_230 0.0905848456 - - PREDICTED: uncharacterized protein LOC105135159 [Populus euphratica]
11 Hb_000311_100 0.0906513032 - - conserved hypothetical protein [Ricinus communis]
12 Hb_005827_020 0.0956510295 - - PREDICTED: probable leucine-rich repeat receptor-like protein kinase At5g49770 [Populus euphratica]
13 Hb_026198_080 0.0958530998 transcription factor TF Family: NAC PREDICTED: NAC domain-containing protein 7 [Populus euphratica]
14 Hb_038927_020 0.097672604 - - PREDICTED: rac-like GTP-binding protein RAC13 [Cucumis melo]
15 Hb_138977_010 0.0984752303 - - unnamed protein product [Vitis vinifera]
16 Hb_001514_050 0.1004549986 - - PREDICTED: probable carbohydrate esterase At4g34215 [Jatropha curcas]
17 Hb_007281_010 0.1009267884 - - transferase, transferring glycosyl groups, putative [Ricinus communis]
18 Hb_001935_060 0.1045921498 - - PREDICTED: metalloendoproteinase 1 [Jatropha curcas]
19 Hb_000086_490 0.1046347784 - - cellulose synthase [Populus tomentosa]
20 Hb_008001_030 0.1069068896 - - PREDICTED: ent-kaurenoic acid oxidase 1-like isoform X1 [Jatropha curcas]

Gene co-expression network

sample Hb_007227_030 Hb_007227_030 Hb_000165_260 Hb_000165_260 Hb_007227_030--Hb_000165_260 Hb_000328_030 Hb_000328_030 Hb_007227_030--Hb_000328_030 Hb_002311_010 Hb_002311_010 Hb_007227_030--Hb_002311_010 Hb_001712_030 Hb_001712_030 Hb_007227_030--Hb_001712_030 Hb_003090_190 Hb_003090_190 Hb_007227_030--Hb_003090_190 Hb_001366_360 Hb_001366_360 Hb_007227_030--Hb_001366_360 Hb_000165_260--Hb_003090_190 Hb_000165_260--Hb_000328_030 Hb_000311_100 Hb_000311_100 Hb_000165_260--Hb_000311_100 Hb_000165_260--Hb_001712_030 Hb_000086_490 Hb_000086_490 Hb_000165_260--Hb_000086_490 Hb_000328_030--Hb_000086_490 Hb_001377_230 Hb_001377_230 Hb_000328_030--Hb_001377_230 Hb_042083_010 Hb_042083_010 Hb_000328_030--Hb_042083_010 Hb_005523_030 Hb_005523_030 Hb_000328_030--Hb_005523_030 Hb_015807_090 Hb_015807_090 Hb_000328_030--Hb_015807_090 Hb_038927_020 Hb_038927_020 Hb_002311_010--Hb_038927_020 Hb_001935_060 Hb_001935_060 Hb_002311_010--Hb_001935_060 Hb_007281_010 Hb_007281_010 Hb_002311_010--Hb_007281_010 Hb_001377_220 Hb_001377_220 Hb_002311_010--Hb_001377_220 Hb_000416_020 Hb_000416_020 Hb_002311_010--Hb_000416_020 Hb_010166_010 Hb_010166_010 Hb_002311_010--Hb_010166_010 Hb_000462_040 Hb_000462_040 Hb_001712_030--Hb_000462_040 Hb_001712_030--Hb_038927_020 Hb_001712_030--Hb_002311_010 Hb_001712_030--Hb_007281_010 Hb_001712_030--Hb_000311_100 Hb_003090_190--Hb_000328_030 Hb_000245_110 Hb_000245_110 Hb_003090_190--Hb_000245_110 Hb_003090_190--Hb_000311_100 Hb_000012_380 Hb_000012_380 Hb_003090_190--Hb_000012_380 Hb_003090_190--Hb_015807_090 Hb_000020_180 Hb_000020_180 Hb_001366_360--Hb_000020_180 Hb_008001_030 Hb_008001_030 Hb_001366_360--Hb_008001_030 Hb_001366_360--Hb_000165_260 Hb_001366_360--Hb_000311_100 Hb_005827_020 Hb_005827_020 Hb_001366_360--Hb_005827_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.179651 0.160057 1.55886 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 1.54815

CAGE analysis