Hb_007251_010

Information

Type -
Description -
Location Contig7251: 3770-19809
Sequence    

Annotation

kegg
ID rcu:RCOM_0818440
description kinase, putative (EC:2.7.10.2)
nr
ID XP_012074616.1
description PREDICTED: L-type lectin-domain containing receptor kinase IX.1-like [Jatropha curcas]
swissprot
ID Q9LXA5
description L-type lectin-domain containing receptor kinase IX.1 OS=Arabidopsis thaliana GN=LECRK91 PE=2 SV=1
trembl
ID A0A067KUK3
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_09932 PE=3 SV=1
Gene Ontology
ID GO:0000166
description l-type lectin-domain containing receptor kinase -like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_007251_010 0.0 - - PREDICTED: L-type lectin-domain containing receptor kinase IX.1-like [Jatropha curcas]
2 Hb_010132_070 0.0001199522 - - DNA/RNA polymerases superfamily protein [Theobroma cacao]
3 Hb_034066_010 0.0001479204 - - DNA/RNA polymerases superfamily protein [Theobroma cacao]
4 Hb_144850_070 0.0001929159 - - OSJNBa0032N05.11 [Oryza sativa Japonica Group]
5 Hb_012535_030 0.0002011124 - - hypothetical protein PRUPE_ppa015000mg [Prunus persica]
6 Hb_007167_100 0.0002279095 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC104235718, partial [Nicotiana sylvestris]
7 Hb_114981_010 0.0002671171 - - hypothetical protein PRUPE_ppa015000mg [Prunus persica]
8 Hb_004667_010 0.0003064421 - - DNA/RNA polymerases superfamily protein [Theobroma cacao]
9 Hb_007719_020 0.0003338415 - - hypothetical protein PRUPE_ppa021229mg [Prunus persica]
10 Hb_000466_180 0.0003731097 - - DNA/RNA polymerases superfamily protein [Theobroma cacao]
11 Hb_010907_010 0.0004091415 - - PREDICTED: uncharacterized protein LOC105634770 [Jatropha curcas]
12 Hb_147844_010 0.0005035768 - - putative 60S ribosomal protein L37 [Aegilops tauschii]
13 Hb_007014_020 0.0005197808 - - PREDICTED: uncharacterized protein LOC105631130 [Jatropha curcas]
14 Hb_025864_010 0.0006213251 - - DNA/RNA polymerases superfamily protein [Theobroma cacao]
15 Hb_001446_050 0.000904539 - - putative polyprotein [Oryza sativa Japonica Group]
16 Hb_010051_010 0.0009301767 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC104235718, partial [Nicotiana sylvestris]
17 Hb_033123_010 0.0009791461 - - Putative polyprotein [Oryza sativa Japonica Group]
18 Hb_007332_010 0.0012597031 - - hypothetical protein PRUPE_ppa022673mg [Prunus persica]
19 Hb_013781_010 0.001702077 - - hypothetical protein VITISV_030726 [Vitis vinifera]
20 Hb_015337_010 0.0017369485 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC104235718, partial [Nicotiana sylvestris]

Gene co-expression network

sample Hb_007251_010 Hb_007251_010 Hb_010132_070 Hb_010132_070 Hb_007251_010--Hb_010132_070 Hb_034066_010 Hb_034066_010 Hb_007251_010--Hb_034066_010 Hb_144850_070 Hb_144850_070 Hb_007251_010--Hb_144850_070 Hb_012535_030 Hb_012535_030 Hb_007251_010--Hb_012535_030 Hb_007167_100 Hb_007167_100 Hb_007251_010--Hb_007167_100 Hb_114981_010 Hb_114981_010 Hb_007251_010--Hb_114981_010 Hb_010132_070--Hb_034066_010 Hb_010132_070--Hb_144850_070 Hb_010132_070--Hb_012535_030 Hb_010132_070--Hb_114981_010 Hb_004667_010 Hb_004667_010 Hb_010132_070--Hb_004667_010 Hb_034066_010--Hb_144850_070 Hb_034066_010--Hb_012535_030 Hb_034066_010--Hb_114981_010 Hb_034066_010--Hb_004667_010 Hb_144850_070--Hb_012535_030 Hb_144850_070--Hb_114981_010 Hb_144850_070--Hb_004667_010 Hb_007719_020 Hb_007719_020 Hb_144850_070--Hb_007719_020 Hb_012535_030--Hb_114981_010 Hb_012535_030--Hb_004667_010 Hb_012535_030--Hb_007719_020 Hb_000466_180 Hb_000466_180 Hb_007167_100--Hb_000466_180 Hb_007167_100--Hb_010132_070 Hb_007167_100--Hb_034066_010 Hb_007167_100--Hb_144850_070 Hb_007167_100--Hb_012535_030 Hb_114981_010--Hb_004667_010 Hb_114981_010--Hb_007719_020 Hb_010907_010 Hb_010907_010 Hb_114981_010--Hb_010907_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.00298566 0.0161856

CAGE analysis