Hb_007259_040

Information

Type -
Description -
Location Contig7259: 91558-96857
Sequence    

Annotation

kegg
ID pper:PRUPE_ppa023906mg
description hypothetical protein
nr
ID CAN67876.1
description hypothetical protein VITISV_005492 [Vitis vinifera]
swissprot
ID Q9LW83
description G-type lectin S-receptor-like serine/threonine-protein kinase CES101 OS=Arabidopsis thaliana GN=CES101 PE=2 SV=2
trembl
ID F6I1Y7
description Putative uncharacterized protein OS=Vitis vinifera GN=VIT_00s0374g00020 PE=3 SV=1
Gene Ontology
ID GO:0004674
description g-type lectin s-receptor-like serine threonine-protein kinase at1g11410

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_55858: 96534-96645
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_007259_040 0.0 - - hypothetical protein VITISV_005492 [Vitis vinifera]
2 Hb_001248_030 0.1665086193 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
3 Hb_044724_010 0.1668433466 - - hypothetical protein JCGZ_01308 [Jatropha curcas]
4 Hb_000645_210 0.1823533171 transcription factor TF Family: CAMTA PREDICTED: calmodulin-binding transcription activator 5-like isoform X2 [Jatropha curcas]
5 Hb_002304_140 0.1824794715 - - ring finger protein, putative [Ricinus communis]
6 Hb_006717_070 0.1884093774 transcription factor TF Family: MYB-related PREDICTED: transcription factor CPC-like [Jatropha curcas]
7 Hb_004195_110 0.1890738141 - - hypothetical protein JCGZ_24010 [Jatropha curcas]
8 Hb_003894_100 0.1900586731 - - PREDICTED: AT-hook motif nuclear-localized protein 1-like [Jatropha curcas]
9 Hb_000181_160 0.1924445654 - - PREDICTED: uncharacterized protein LOC105637575 isoform X2 [Jatropha curcas]
10 Hb_003576_050 0.1929882673 transcription factor TF Family: EIL ETHYLENE-INSENSITIVE3 protein, putative [Ricinus communis]
11 Hb_009823_010 0.1941207978 - - PREDICTED: uncharacterized protein LOC105633096 [Jatropha curcas]
12 Hb_001408_050 0.2003416693 - - conserved hypothetical protein [Ricinus communis]
13 Hb_000098_310 0.2097453846 - - RecName: Full=Anthocyanidin 3-O-glucosyltransferase 1; AltName: Full=Flavonol 3-O-glucosyltransferase 1; AltName: Full=UDP-glucose flavonoid 3-O-glucosyltransferase 1 [Manihot esculenta]
14 Hb_002662_090 0.212056686 - - PREDICTED: probable inactive receptor kinase At5g67200 [Jatropha curcas]
15 Hb_001946_150 0.2120701906 - - conserved hypothetical protein [Ricinus communis]
16 Hb_003845_020 0.2122746765 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
17 Hb_000976_440 0.2124480573 - - UDP-glucosyltransferase, putative [Ricinus communis]
18 Hb_003626_040 0.2132519432 - - PREDICTED: probable 2-oxoglutarate-dependent dioxygenase At3g49630 isoform X2 [Jatropha curcas]
19 Hb_000762_070 0.214787583 transcription factor TF Family: MYB PREDICTED: transcription factor WER-like [Jatropha curcas]
20 Hb_000000_240 0.2148937141 - - PREDICTED: protein LYK5-like [Jatropha curcas]

Gene co-expression network

sample Hb_007259_040 Hb_007259_040 Hb_001248_030 Hb_001248_030 Hb_007259_040--Hb_001248_030 Hb_044724_010 Hb_044724_010 Hb_007259_040--Hb_044724_010 Hb_000645_210 Hb_000645_210 Hb_007259_040--Hb_000645_210 Hb_002304_140 Hb_002304_140 Hb_007259_040--Hb_002304_140 Hb_006717_070 Hb_006717_070 Hb_007259_040--Hb_006717_070 Hb_004195_110 Hb_004195_110 Hb_007259_040--Hb_004195_110 Hb_007416_150 Hb_007416_150 Hb_001248_030--Hb_007416_150 Hb_009823_010 Hb_009823_010 Hb_001248_030--Hb_009823_010 Hb_003576_050 Hb_003576_050 Hb_001248_030--Hb_003576_050 Hb_001408_050 Hb_001408_050 Hb_001248_030--Hb_001408_050 Hb_000638_090 Hb_000638_090 Hb_001248_030--Hb_000638_090 Hb_001248_030--Hb_002304_140 Hb_002774_090 Hb_002774_090 Hb_044724_010--Hb_002774_090 Hb_005779_040 Hb_005779_040 Hb_044724_010--Hb_005779_040 Hb_004410_150 Hb_004410_150 Hb_044724_010--Hb_004410_150 Hb_003894_100 Hb_003894_100 Hb_044724_010--Hb_003894_100 Hb_003504_040 Hb_003504_040 Hb_044724_010--Hb_003504_040 Hb_000928_040 Hb_000928_040 Hb_000645_210--Hb_000928_040 Hb_127886_010 Hb_127886_010 Hb_000645_210--Hb_127886_010 Hb_001206_090 Hb_001206_090 Hb_000645_210--Hb_001206_090 Hb_031527_060 Hb_031527_060 Hb_000645_210--Hb_031527_060 Hb_001114_070 Hb_001114_070 Hb_000645_210--Hb_001114_070 Hb_000093_150 Hb_000093_150 Hb_000645_210--Hb_000093_150 Hb_002304_140--Hb_007416_150 Hb_002304_140--Hb_004195_110 Hb_002304_140--Hb_009823_010 Hb_000165_210 Hb_000165_210 Hb_002304_140--Hb_000165_210 Hb_000098_310 Hb_000098_310 Hb_002304_140--Hb_000098_310 Hb_006717_070--Hb_127886_010 Hb_009732_020 Hb_009732_020 Hb_006717_070--Hb_009732_020 Hb_003626_040 Hb_003626_040 Hb_006717_070--Hb_003626_040 Hb_000395_220 Hb_000395_220 Hb_006717_070--Hb_000395_220 Hb_000362_110 Hb_000362_110 Hb_006717_070--Hb_000362_110 Hb_003813_120 Hb_003813_120 Hb_006717_070--Hb_003813_120 Hb_000670_110 Hb_000670_110 Hb_004195_110--Hb_000670_110 Hb_004195_110--Hb_001248_030 Hb_004657_040 Hb_004657_040 Hb_004195_110--Hb_004657_040 Hb_004195_110--Hb_007416_150 Hb_000181_160 Hb_000181_160 Hb_004195_110--Hb_000181_160
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.027296 0.274992 0.0561715 0.0951016 0.0422293 0.0206409
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0667054 0.065613 0 0.421934 0.0279264

CAGE analysis