Hb_007264_050

Information

Type -
Description -
Location Contig7264: 64857-65706
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_007264_050 0.0 - - -
2 Hb_000215_380 0.0287739355 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At1g61370 [Jatropha curcas]
3 Hb_007328_020 0.0289026827 - - -
4 Hb_000563_370 0.0290073428 - - hypothetical protein JCGZ_18919 [Jatropha curcas]
5 Hb_044724_020 0.0301026113 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At3g47570 [Fragaria vesca subsp. vesca]
6 Hb_106595_010 0.0355162057 - - hypothetical protein B456_003G065300 [Gossypium raimondii]
7 Hb_064583_010 0.0424752482 - - PREDICTED: germin-like protein subfamily 1 member 7 [Vitis vinifera]
8 Hb_128894_010 0.0461752809 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
9 Hb_099085_010 0.0546318078 - - PREDICTED: putative receptor-like protein kinase At3g47110 [Jatropha curcas]
10 Hb_034558_010 0.0592628008 - - -
11 Hb_001766_090 0.0707147712 - - hypothetical protein JCGZ_23602 [Jatropha curcas]
12 Hb_030312_060 0.075790538 - - PREDICTED: uncharacterized protein LOC105634226 [Jatropha curcas]
13 Hb_000016_290 0.0837481663 - - multidrug resistance pump, putative [Ricinus communis]
14 Hb_001796_010 0.0891888114 - - purine transporter, putative [Ricinus communis]
15 Hb_030593_010 0.0910401731 - - hypothetical protein JCGZ_06063 [Jatropha curcas]
16 Hb_005050_010 0.0938168738 - - hypothetical protein JCGZ_04974 [Jatropha curcas]
17 Hb_007658_030 0.0945055755 - - PREDICTED: lupeol synthase-like isoform X1 [Populus euphratica]
18 Hb_000484_050 0.1013544877 - - hypothetical protein CICLE_v10028549mg [Citrus clementina]
19 Hb_186671_020 0.102498231 - - ankyrin repeat-containing protein, putative [Ricinus communis]
20 Hb_018609_010 0.1041785811 - - conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_007264_050 Hb_007264_050 Hb_000215_380 Hb_000215_380 Hb_007264_050--Hb_000215_380 Hb_007328_020 Hb_007328_020 Hb_007264_050--Hb_007328_020 Hb_000563_370 Hb_000563_370 Hb_007264_050--Hb_000563_370 Hb_044724_020 Hb_044724_020 Hb_007264_050--Hb_044724_020 Hb_106595_010 Hb_106595_010 Hb_007264_050--Hb_106595_010 Hb_064583_010 Hb_064583_010 Hb_007264_050--Hb_064583_010 Hb_000215_380--Hb_007328_020 Hb_000215_380--Hb_000563_370 Hb_000215_380--Hb_044724_020 Hb_000215_380--Hb_106595_010 Hb_000215_380--Hb_064583_010 Hb_007328_020--Hb_000563_370 Hb_007328_020--Hb_044724_020 Hb_007328_020--Hb_106595_010 Hb_007328_020--Hb_064583_010 Hb_000563_370--Hb_044724_020 Hb_000563_370--Hb_106595_010 Hb_000563_370--Hb_064583_010 Hb_044724_020--Hb_106595_010 Hb_128894_010 Hb_128894_010 Hb_044724_020--Hb_128894_010 Hb_106595_010--Hb_128894_010 Hb_034558_010 Hb_034558_010 Hb_106595_010--Hb_034558_010 Hb_099085_010 Hb_099085_010 Hb_064583_010--Hb_099085_010 Hb_064583_010--Hb_044724_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 332.651 0.153452 0.266198 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.145393 0 9.95372 0

CAGE analysis