Hb_007286_020

Information

Type -
Description -
Location Contig7286: 16009-20127
Sequence    

Annotation

kegg
ID aly:ARALYDRAFT_470711
description hypothetical protein
nr
ID XP_010108482.1
description hypothetical protein L484_010675 [Morus notabilis]
swissprot
ID Q8RXL8
description Uncharacterized membrane protein At1g06890 OS=Arabidopsis thaliana GN=At1g06890 PE=1 SV=1
trembl
ID W9SAD1
description Uncharacterized protein OS=Morus notabilis GN=L484_010675 PE=4 SV=1
Gene Ontology
ID GO:0005768
description uncharacterized membrane protein at1g06890

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_55882: 16009-20094
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_007286_020 0.0 - - hypothetical protein L484_010675 [Morus notabilis]
2 Hb_001051_070 0.0731484873 - - PREDICTED: protein ENHANCED DISEASE RESISTANCE 2 isoform X2 [Jatropha curcas]
3 Hb_004102_170 0.0759863142 - - PREDICTED: lys-63-specific deubiquitinase BRCC36-like [Jatropha curcas]
4 Hb_086639_080 0.0786722709 - - conserved hypothetical protein [Ricinus communis]
5 Hb_010042_030 0.079590372 - - PREDICTED: UDP-N-acetylglucosamine diphosphorylase 1 [Jatropha curcas]
6 Hb_000679_100 0.0852669209 - - PREDICTED: probable sugar phosphate/phosphate translocator At5g25400 isoform X1 [Jatropha curcas]
7 Hb_002486_050 0.0879164009 - - Multiple inositol polyphosphate phosphatase 1 precursor, putative [Ricinus communis]
8 Hb_000622_110 0.0884985021 - - cmp-sialic acid transporter, putative [Ricinus communis]
9 Hb_007137_050 0.0905630186 - - Uncharacterized protein isoform 1 [Theobroma cacao]
10 Hb_000085_450 0.0908981478 transcription factor TF Family: WRKY PREDICTED: probable WRKY transcription factor 20 [Jatropha curcas]
11 Hb_000023_300 0.0911131118 - - Ubiquitin carboxyl-terminal hydrolase, putative [Ricinus communis]
12 Hb_001097_040 0.0921959476 - - PREDICTED: probable dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 3B [Jatropha curcas]
13 Hb_015026_130 0.0932260003 - - quinone oxidoreductase, putative [Ricinus communis]
14 Hb_004040_030 0.0935171832 - - PREDICTED: probable inactive purple acid phosphatase 28 isoform X2 [Jatropha curcas]
15 Hb_000140_350 0.093796659 - - conserved hypothetical protein [Ricinus communis]
16 Hb_004480_020 0.0941869503 - - PREDICTED: uncharacterized protein LOC105637166 [Jatropha curcas]
17 Hb_000146_040 0.0942672555 - - PREDICTED: reticulon-like protein B11 [Jatropha curcas]
18 Hb_001159_030 0.0944269919 - - PREDICTED: probable protein S-acyltransferase 14 [Jatropha curcas]
19 Hb_000085_260 0.095878528 - - glycerophosphoryl diester phosphodiesterase, putative [Ricinus communis]
20 Hb_000787_160 0.0966183089 - - PREDICTED: GDP-mannose transporter GONST1 isoform X1 [Jatropha curcas]

Gene co-expression network

sample Hb_007286_020 Hb_007286_020 Hb_001051_070 Hb_001051_070 Hb_007286_020--Hb_001051_070 Hb_004102_170 Hb_004102_170 Hb_007286_020--Hb_004102_170 Hb_086639_080 Hb_086639_080 Hb_007286_020--Hb_086639_080 Hb_010042_030 Hb_010042_030 Hb_007286_020--Hb_010042_030 Hb_000679_100 Hb_000679_100 Hb_007286_020--Hb_000679_100 Hb_002486_050 Hb_002486_050 Hb_007286_020--Hb_002486_050 Hb_000477_100 Hb_000477_100 Hb_001051_070--Hb_000477_100 Hb_000023_300 Hb_000023_300 Hb_001051_070--Hb_000023_300 Hb_011214_160 Hb_011214_160 Hb_001051_070--Hb_011214_160 Hb_003998_040 Hb_003998_040 Hb_001051_070--Hb_003998_040 Hb_001051_070--Hb_000679_100 Hb_000787_160 Hb_000787_160 Hb_004102_170--Hb_000787_160 Hb_000049_020 Hb_000049_020 Hb_004102_170--Hb_000049_020 Hb_000146_040 Hb_000146_040 Hb_004102_170--Hb_000146_040 Hb_000345_160 Hb_000345_160 Hb_004102_170--Hb_000345_160 Hb_001405_210 Hb_001405_210 Hb_004102_170--Hb_001405_210 Hb_005797_010 Hb_005797_010 Hb_004102_170--Hb_005797_010 Hb_000139_530 Hb_000139_530 Hb_086639_080--Hb_000139_530 Hb_000622_110 Hb_000622_110 Hb_086639_080--Hb_000622_110 Hb_000002_480 Hb_000002_480 Hb_086639_080--Hb_000002_480 Hb_000331_370 Hb_000331_370 Hb_086639_080--Hb_000331_370 Hb_086639_080--Hb_004102_170 Hb_000085_260 Hb_000085_260 Hb_010042_030--Hb_000085_260 Hb_001159_030 Hb_001159_030 Hb_010042_030--Hb_001159_030 Hb_005062_110 Hb_005062_110 Hb_010042_030--Hb_005062_110 Hb_002007_260 Hb_002007_260 Hb_010042_030--Hb_002007_260 Hb_000579_130 Hb_000579_130 Hb_010042_030--Hb_000579_130 Hb_000320_290 Hb_000320_290 Hb_010042_030--Hb_000320_290 Hb_000679_100--Hb_000085_260 Hb_001097_040 Hb_001097_040 Hb_000679_100--Hb_001097_040 Hb_000679_100--Hb_000023_300 Hb_000679_100--Hb_010042_030 Hb_003209_130 Hb_003209_130 Hb_002486_050--Hb_003209_130 Hb_000256_230 Hb_000256_230 Hb_002486_050--Hb_000256_230 Hb_002486_050--Hb_005062_110 Hb_002486_050--Hb_000622_110 Hb_000665_170 Hb_000665_170 Hb_002486_050--Hb_000665_170 Hb_002486_050--Hb_000085_260
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
27.5381 38.0795 35.1251 99.4944 24.9206 38.8668
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
20.2472 20.9451 24.4427 45.846 31.5322

CAGE analysis