Hb_007313_010

Information

Type -
Description -
Location Contig7313: 2821-16729
Sequence    

Annotation

kegg
ID fve:101306742
description uncharacterized protein LOC101306742
nr
ID KDP23565.1
description hypothetical protein JCGZ_23398 [Jatropha curcas]
swissprot
ID Q0WQ63
description Sugar transporter ERD6-like 8 OS=Arabidopsis thaliana GN=At3g05150 PE=2 SV=1
trembl
ID A0A067JU96
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_23398 PE=3 SV=1
Gene Ontology
ID GO:0005634
description sugar transporter erd6-like 8

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_56012: 4178-5544 , PASA_asmbl_56013: 8763-9719 , PASA_asmbl_56014: 10279-12208 , PASA_asmbl_56015: 13073-14417
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_007313_010 0.0 - - hypothetical protein JCGZ_23398 [Jatropha curcas]
2 Hb_000834_210 0.058991295 - - unnamed protein product [Vitis vinifera]
3 Hb_000723_240 0.0744568916 - - phenylalanine ammonia-lyase 2 [Manihot esculenta]
4 Hb_003160_050 0.07838277 - - chloroplast-targeted copper chaperone, putative [Ricinus communis]
5 Hb_003768_100 0.1058169016 - - hypothetical protein JCGZ_19930 [Jatropha curcas]
6 Hb_001514_070 0.1081675145 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
7 Hb_003734_120 0.1107467767 - - PREDICTED: uncharacterized protein LOC105632812 isoform X1 [Jatropha curcas]
8 Hb_001470_040 0.1161131107 - - PREDICTED: probable BOI-related E3 ubiquitin-protein ligase 3 [Jatropha curcas]
9 Hb_011861_020 0.1173258483 desease resistance Gene Name: NB-ARC hypothetical protein JCGZ_06096 [Jatropha curcas]
10 Hb_000393_030 0.1176053194 - - UDP-glucosyltransferase, putative [Ricinus communis]
11 Hb_006618_080 0.1186447742 - - PREDICTED: non-specific lipid-transfer protein [Jatropha curcas]
12 Hb_002003_010 0.1190365938 - - hypothetical protein JCGZ_15062 [Jatropha curcas]
13 Hb_000300_170 0.1194326399 - - PREDICTED: uncharacterized protein LOC105632565 [Jatropha curcas]
14 Hb_000139_500 0.1199836031 - - PREDICTED: putative uncharacterized protein DDB_G0286901 [Prunus mume]
15 Hb_008418_010 0.1237847472 transcription factor TF Family: bHLH PREDICTED: transcription factor bHLH93-like [Jatropha curcas]
16 Hb_000318_060 0.1252362273 - - conserved hypothetical protein [Ricinus communis]
17 Hb_000589_100 0.1259354763 - - Protein kinase APK1B, chloroplast precursor, putative [Ricinus communis]
18 Hb_000276_030 0.1260877721 - - dimethylaniline monooxygenase, putative [Ricinus communis]
19 Hb_001053_110 0.1296111169 - - PREDICTED: uncharacterized protein LOC105628699 [Jatropha curcas]
20 Hb_000057_180 0.1350348464 - - hypothetical protein POPTR_0001s18200g [Populus trichocarpa]

Gene co-expression network

sample Hb_007313_010 Hb_007313_010 Hb_000834_210 Hb_000834_210 Hb_007313_010--Hb_000834_210 Hb_000723_240 Hb_000723_240 Hb_007313_010--Hb_000723_240 Hb_003160_050 Hb_003160_050 Hb_007313_010--Hb_003160_050 Hb_003768_100 Hb_003768_100 Hb_007313_010--Hb_003768_100 Hb_001514_070 Hb_001514_070 Hb_007313_010--Hb_001514_070 Hb_003734_120 Hb_003734_120 Hb_007313_010--Hb_003734_120 Hb_000834_210--Hb_003160_050 Hb_000834_210--Hb_000723_240 Hb_002003_010 Hb_002003_010 Hb_000834_210--Hb_002003_010 Hb_011861_020 Hb_011861_020 Hb_000834_210--Hb_011861_020 Hb_000057_180 Hb_000057_180 Hb_000834_210--Hb_000057_180 Hb_000723_240--Hb_003160_050 Hb_008418_010 Hb_008418_010 Hb_000723_240--Hb_008418_010 Hb_001922_010 Hb_001922_010 Hb_000723_240--Hb_001922_010 Hb_000589_100 Hb_000589_100 Hb_000723_240--Hb_000589_100 Hb_003160_050--Hb_003768_100 Hb_000139_500 Hb_000139_500 Hb_003160_050--Hb_000139_500 Hb_003160_050--Hb_002003_010 Hb_003768_100--Hb_008418_010 Hb_003768_100--Hb_000723_240 Hb_003226_050 Hb_003226_050 Hb_003768_100--Hb_003226_050 Hb_007017_120 Hb_007017_120 Hb_003768_100--Hb_007017_120 Hb_000393_030 Hb_000393_030 Hb_001514_070--Hb_000393_030 Hb_002870_010 Hb_002870_010 Hb_001514_070--Hb_002870_010 Hb_005211_090 Hb_005211_090 Hb_001514_070--Hb_005211_090 Hb_001470_040 Hb_001470_040 Hb_001514_070--Hb_001470_040 Hb_001329_110 Hb_001329_110 Hb_001514_070--Hb_001329_110 Hb_000963_010 Hb_000963_010 Hb_001514_070--Hb_000963_010 Hb_000276_030 Hb_000276_030 Hb_003734_120--Hb_000276_030 Hb_003787_060 Hb_003787_060 Hb_003734_120--Hb_003787_060 Hb_188923_010 Hb_188923_010 Hb_003734_120--Hb_188923_010 Hb_018133_110 Hb_018133_110 Hb_003734_120--Hb_018133_110 Hb_002042_200 Hb_002042_200 Hb_003734_120--Hb_002042_200
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 1.42202 2.09588 3.67479 0 0.00461946
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.00900741 0 8.62133 1.04157

CAGE analysis