Hb_007313_050

Information

Type -
Description -
Location Contig7313: 50582-52397
Sequence    

Annotation

kegg
ID rcu:RCOM_1429810
description Histidine-containing phosphotransfer protein, putative (EC:1.3.1.74)
nr
ID XP_002512314.1
description Histidine-containing phosphotransfer protein, putative [Ricinus communis]
swissprot
ID Q9ZNV9
description Histidine-containing phosphotransfer protein 1 OS=Arabidopsis thaliana GN=AHP1 PE=1 SV=1
trembl
ID B9REZ5
description Histidine-containing phosphotransfer protein, putative OS=Ricinus communis GN=RCOM_1429810 PE=4 SV=1
Gene Ontology
ID GO:0005622
description histidine-containing phosphotransfer protein 1-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_56020: 50674-52396 , PASA_asmbl_56021: 51419-52396 , PASA_asmbl_56022: 51752-52107
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_007313_050 0.0 - - Histidine-containing phosphotransfer protein, putative [Ricinus communis]
2 Hb_021443_020 0.0702628941 - - PREDICTED: uncharacterized protein LOC105648569 [Jatropha curcas]
3 Hb_001213_080 0.0736239423 - - PREDICTED: tubulin beta chain-like [Jatropha curcas]
4 Hb_003939_090 0.0965215951 transcription factor TF Family: NAC transcription factor, putative [Ricinus communis]
5 Hb_001059_050 0.0978785256 - - PREDICTED: putative F-box/LRR-repeat protein At3g18150 [Jatropha curcas]
6 Hb_035006_010 0.1020252829 - - hypothetical protein POPTR_0017s11350g [Populus trichocarpa]
7 Hb_000286_210 0.1135741225 - - hypothetical protein EUGRSUZ_C00018 [Eucalyptus grandis]
8 Hb_005389_090 0.1138024893 transcription factor TF Family: AUX/IAA Auxin-responsive protein IAA27, putative [Ricinus communis]
9 Hb_002894_040 0.1140795356 - - conserved hypothetical protein [Ricinus communis]
10 Hb_000991_110 0.1193553857 - - PREDICTED: uncharacterized protein LOC105636336 [Jatropha curcas]
11 Hb_148914_020 0.1205938661 - - PREDICTED: uncharacterized protein LOC105637821 [Jatropha curcas]
12 Hb_000128_090 0.1215584825 - - Reticuline oxidase precursor, putative [Ricinus communis]
13 Hb_132517_010 0.1222147448 - - PREDICTED: non-functional NADPH-dependent codeinone reductase 2-like isoform X3 [Populus euphratica]
14 Hb_000002_230 0.127195864 - - RING/U-box superfamily protein [Theobroma cacao]
15 Hb_001610_050 0.1297918128 - - PREDICTED: subtilisin-like protease-like [Solanum tuberosum]
16 Hb_005900_020 0.1303017777 - - -
17 Hb_145268_010 0.1315939756 - - PREDICTED: proline-rich receptor-like protein kinase PERK15 [Jatropha curcas]
18 Hb_006573_060 0.1325501871 - - hypothetical protein [Bruguiera gymnorhiza]
19 Hb_038718_010 0.136028096 - - Disease resistance protein RFL1, putative [Ricinus communis]
20 Hb_151616_010 0.1366610027 - - -

Gene co-expression network

sample Hb_007313_050 Hb_007313_050 Hb_021443_020 Hb_021443_020 Hb_007313_050--Hb_021443_020 Hb_001213_080 Hb_001213_080 Hb_007313_050--Hb_001213_080 Hb_003939_090 Hb_003939_090 Hb_007313_050--Hb_003939_090 Hb_001059_050 Hb_001059_050 Hb_007313_050--Hb_001059_050 Hb_035006_010 Hb_035006_010 Hb_007313_050--Hb_035006_010 Hb_000286_210 Hb_000286_210 Hb_007313_050--Hb_000286_210 Hb_021443_020--Hb_035006_010 Hb_021443_020--Hb_001059_050 Hb_021443_020--Hb_000286_210 Hb_001610_050 Hb_001610_050 Hb_021443_020--Hb_001610_050 Hb_001227_010 Hb_001227_010 Hb_021443_020--Hb_001227_010 Hb_148914_020 Hb_148914_020 Hb_001213_080--Hb_148914_020 Hb_001213_080--Hb_001059_050 Hb_001213_080--Hb_000286_210 Hb_048937_010 Hb_048937_010 Hb_001213_080--Hb_048937_010 Hb_000128_090 Hb_000128_090 Hb_001213_080--Hb_000128_090 Hb_015884_010 Hb_015884_010 Hb_003939_090--Hb_015884_010 Hb_010642_010 Hb_010642_010 Hb_003939_090--Hb_010642_010 Hb_000702_040 Hb_000702_040 Hb_003939_090--Hb_000702_040 Hb_003939_090--Hb_035006_010 Hb_003939_090--Hb_021443_020 Hb_001059_050--Hb_000286_210 Hb_151616_010 Hb_151616_010 Hb_001059_050--Hb_151616_010 Hb_132517_010 Hb_132517_010 Hb_001059_050--Hb_132517_010 Hb_035006_010--Hb_000286_210 Hb_005900_020 Hb_005900_020 Hb_035006_010--Hb_005900_020 Hb_035006_010--Hb_001059_050 Hb_000286_210--Hb_151616_010 Hb_003012_010 Hb_003012_010 Hb_000286_210--Hb_003012_010 Hb_002639_120 Hb_002639_120 Hb_000286_210--Hb_002639_120
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0278747 33.4337 7.42413 40.8191 0.108874 0.162655
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 8.99618 0.492688

CAGE analysis