Hb_007357_010

Information

Type -
Description -
Location Contig7357: 24787-27625
Sequence    

Annotation

kegg
ID rcu:RCOM_0813450
description cytochrome P450, putative (EC:1.14.13.79)
nr
ID XP_002518764.1
description cytochrome P450, putative [Ricinus communis]
swissprot
ID Q9LJK2
description Abscisic acid 8'-hydroxylase 4 OS=Arabidopsis thaliana GN=CYP707A4 PE=2 SV=2
trembl
ID B9RYI0
description Cytochrome P450, putative OS=Ricinus communis GN=RCOM_0813450 PE=3 SV=1
Gene Ontology
ID GO:0005506
description abscisic acid 8 -hydroxylase 4

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_56206: 24863-25990
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_007357_010 0.0 - - cytochrome P450, putative [Ricinus communis]
2 Hb_001277_370 0.0820005954 transcription factor TF Family: HSF Heat shock factor protein HSF30, putative [Ricinus communis]
3 Hb_001477_060 0.0830491403 transcription factor TF Family: C2H2 zinc finger family protein [Populus trichocarpa]
4 Hb_124677_090 0.0840527479 - - conserved hypothetical protein [Ricinus communis]
5 Hb_001715_060 0.0947303879 - - PREDICTED: gibberellin 3-beta-dioxygenase 1 [Jatropha curcas]
6 Hb_007632_230 0.0998630914 transcription factor TF Family: NF-YB PREDICTED: nuclear transcription factor Y subunit B-3-like [Jatropha curcas]
7 Hb_001221_070 0.1001472318 - - PREDICTED: calcium-binding protein CML38-like [Jatropha curcas]
8 Hb_161103_010 0.1074293283 - - leucine-rich repeat receptor protein kinase exs precursor, putative [Ricinus communis]
9 Hb_054926_010 0.1113633691 - - glutamate receptor 2 plant, putative [Ricinus communis]
10 Hb_008895_020 0.1124061607 - - Phospho-N-acetylmuramoyl-pentapeptide-transferase, putative [Theobroma cacao]
11 Hb_001638_340 0.1147297409 - - conserved hypothetical protein [Ricinus communis]
12 Hb_004553_040 0.1166061086 - - PREDICTED: protein YLS9-like [Jatropha curcas]
13 Hb_008406_060 0.1184035012 - - PREDICTED: non-specific lipid-transfer protein 1-like [Jatropha curcas]
14 Hb_006651_030 0.1202183813 - - unnamed protein product [Homo sapiens]
15 Hb_001022_070 0.1253673984 - - cell wall invertase [Manihot esculenta]
16 Hb_029977_030 0.1278444639 transcription factor TF Family: bZIP conserved hypothetical protein [Ricinus communis]
17 Hb_009222_040 0.1291661759 transcription factor TF Family: C2C2-Dof DNA binding with one finger 2.4, putative [Theobroma cacao]
18 Hb_018563_010 0.1311124618 transcription factor TF Family: ERF PREDICTED: ethylene-responsive transcription factor 5-like [Jatropha curcas]
19 Hb_167206_010 0.1358209168 - - hypothetical protein JCGZ_04542 [Jatropha curcas]
20 Hb_000319_010 0.1400804707 - - hypothetical protein POPTR_0016s03600g [Populus trichocarpa]

Gene co-expression network

sample Hb_007357_010 Hb_007357_010 Hb_001277_370 Hb_001277_370 Hb_007357_010--Hb_001277_370 Hb_001477_060 Hb_001477_060 Hb_007357_010--Hb_001477_060 Hb_124677_090 Hb_124677_090 Hb_007357_010--Hb_124677_090 Hb_001715_060 Hb_001715_060 Hb_007357_010--Hb_001715_060 Hb_007632_230 Hb_007632_230 Hb_007357_010--Hb_007632_230 Hb_001221_070 Hb_001221_070 Hb_007357_010--Hb_001221_070 Hb_001277_370--Hb_001221_070 Hb_001277_370--Hb_007632_230 Hb_004553_040 Hb_004553_040 Hb_001277_370--Hb_004553_040 Hb_167206_010 Hb_167206_010 Hb_001277_370--Hb_167206_010 Hb_000319_010 Hb_000319_010 Hb_001277_370--Hb_000319_010 Hb_001477_060--Hb_124677_090 Hb_009222_040 Hb_009222_040 Hb_001477_060--Hb_009222_040 Hb_001638_340 Hb_001638_340 Hb_001477_060--Hb_001638_340 Hb_008895_020 Hb_008895_020 Hb_001477_060--Hb_008895_020 Hb_161103_010 Hb_161103_010 Hb_001477_060--Hb_161103_010 Hb_124677_090--Hb_008895_020 Hb_124677_090--Hb_001638_340 Hb_054926_010 Hb_054926_010 Hb_124677_090--Hb_054926_010 Hb_124677_090--Hb_001715_060 Hb_059275_010 Hb_059275_010 Hb_001715_060--Hb_059275_010 Hb_001715_060--Hb_001638_340 Hb_029977_030 Hb_029977_030 Hb_001715_060--Hb_029977_030 Hb_001715_060--Hb_008895_020 Hb_007632_230--Hb_001221_070 Hb_007632_230--Hb_004553_040 Hb_007632_230--Hb_000319_010 Hb_007632_230--Hb_054926_010 Hb_001221_070--Hb_004553_040 Hb_001221_070--Hb_167206_010 Hb_001221_070--Hb_000319_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.6551 0.959762 1.16973 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0.502839

CAGE analysis