Hb_007370_010

Information

Type -
Description -
Location Contig7370: 26281-28638
Sequence    

Annotation

kegg
ID rcu:RCOM_0803140
description monooxygenase, putative (EC:1.14.13.8)
nr
ID XP_012077457.1
description PREDICTED: indole-3-pyruvate monooxygenase YUCCA6 [Jatropha curcas]
swissprot
ID Q8VZ59
description Indole-3-pyruvate monooxygenase YUCCA6 OS=Arabidopsis thaliana GN=YUC6 PE=1 SV=1
trembl
ID A0A067KPN3
description Flavin-containing monooxygenase OS=Jatropha curcas GN=JCGZ_07791 PE=3 SV=1
Gene Ontology
ID GO:0004499
description indole-3-pyruvate monooxygenase yucca6-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_56220: 26656-28015 , PASA_asmbl_56221: 28350-28487
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_007370_010 0.0 - - PREDICTED: indole-3-pyruvate monooxygenase YUCCA6 [Jatropha curcas]
2 Hb_003633_170 0.0661919277 - - conserved hypothetical protein [Ricinus communis]
3 Hb_003894_180 0.0678005944 - - PREDICTED: uncharacterized protein LOC104245193, partial [Nicotiana sylvestris]
4 Hb_169077_030 0.0685017927 desease resistance Gene Name: NB-ARC PREDICTED: probable disease resistance protein RF9 [Jatropha curcas]
5 Hb_000152_570 0.0731154502 - - 21 kDa protein precursor, putative [Ricinus communis]
6 Hb_031224_010 0.0812214979 - - -
7 Hb_000103_300 0.0846481267 - - PREDICTED: perakine reductase-like [Jatropha curcas]
8 Hb_002566_020 0.0862076709 - - hypothetical protein JCGZ_15085 [Jatropha curcas]
9 Hb_141194_020 0.0919131637 - - carbohydrate transporter, putative [Ricinus communis]
10 Hb_009456_010 0.0967120467 - - PREDICTED: cinnamoyl-CoA reductase 1-like isoform X3 [Populus euphratica]
11 Hb_000193_070 0.0977129558 - - hypothetical protein JCGZ_25373 [Jatropha curcas]
12 Hb_002391_240 0.0981707608 - - conserved hypothetical protein [Ricinus communis]
13 Hb_001410_080 0.1021303467 - - ring finger protein, putative [Ricinus communis]
14 Hb_012395_060 0.1058088535 - - PREDICTED: actin-related protein 2/3 complex subunit 2B [Jatropha curcas]
15 Hb_004466_090 0.1092925697 - - conserved hypothetical protein [Ricinus communis]
16 Hb_002284_060 0.1099088554 - - sugar transporter, putative [Ricinus communis]
17 Hb_005332_160 0.1122215207 - - PREDICTED: BAG family molecular chaperone regulator 2-like [Jatropha curcas]
18 Hb_002783_180 0.1127932228 - - Tubulin beta-6 chain [Gossypium arboreum]
19 Hb_006154_010 0.1147099266 - - UDP-glucose 6-dehydrogenase, putative [Ricinus communis]
20 Hb_000152_880 0.1169232078 - - -

Gene co-expression network

sample Hb_007370_010 Hb_007370_010 Hb_003633_170 Hb_003633_170 Hb_007370_010--Hb_003633_170 Hb_003894_180 Hb_003894_180 Hb_007370_010--Hb_003894_180 Hb_169077_030 Hb_169077_030 Hb_007370_010--Hb_169077_030 Hb_000152_570 Hb_000152_570 Hb_007370_010--Hb_000152_570 Hb_031224_010 Hb_031224_010 Hb_007370_010--Hb_031224_010 Hb_000103_300 Hb_000103_300 Hb_007370_010--Hb_000103_300 Hb_003633_170--Hb_031224_010 Hb_002566_020 Hb_002566_020 Hb_003633_170--Hb_002566_020 Hb_008304_050 Hb_008304_050 Hb_003633_170--Hb_008304_050 Hb_004893_010 Hb_004893_010 Hb_003633_170--Hb_004893_010 Hb_003633_170--Hb_003894_180 Hb_003894_180--Hb_000152_570 Hb_004466_090 Hb_004466_090 Hb_003894_180--Hb_004466_090 Hb_002284_060 Hb_002284_060 Hb_003894_180--Hb_002284_060 Hb_003894_180--Hb_000103_300 Hb_012395_060 Hb_012395_060 Hb_169077_030--Hb_012395_060 Hb_169077_030--Hb_000152_570 Hb_006154_010 Hb_006154_010 Hb_169077_030--Hb_006154_010 Hb_000193_070 Hb_000193_070 Hb_169077_030--Hb_000193_070 Hb_005332_160 Hb_005332_160 Hb_169077_030--Hb_005332_160 Hb_000152_570--Hb_000103_300 Hb_000152_570--Hb_000193_070 Hb_000152_570--Hb_002284_060 Hb_002391_240 Hb_002391_240 Hb_000152_570--Hb_002391_240 Hb_000329_010 Hb_000329_010 Hb_031224_010--Hb_000329_010 Hb_031224_010--Hb_002566_020 Hb_002370_050 Hb_002370_050 Hb_031224_010--Hb_002370_050 Hb_002809_080 Hb_002809_080 Hb_031224_010--Hb_002809_080 Hb_000103_300--Hb_000193_070 Hb_000103_300--Hb_002284_060 Hb_000103_300--Hb_002391_240 Hb_000103_300--Hb_006154_010 Hb_000103_300--Hb_169077_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.263018 0.644804 2.56124 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.749887 1.39943

CAGE analysis