Hb_007382_110

Information

Type -
Description -
Location Contig7382: 60158-61469
Sequence    

Annotation

kegg
ID tcc:TCM_008493
description Senescence-associated gene 29
nr
ID XP_012085745.1
description PREDICTED: bidirectional sugar transporter N3 [Jatropha curcas]
swissprot
ID Q9FY94
description Bidirectional sugar transporter SWEET15 OS=Arabidopsis thaliana GN=SWEET15 PE=2 SV=1
trembl
ID A0A067JSJ9
description Sugar transporter SWEET OS=Jatropha curcas GN=JCGZ_18015 PE=3 SV=1
Gene Ontology
ID GO:0005887
description bidirectional sugar transporter n3

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_56259: 60125-62019
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_007382_110 0.0 - - PREDICTED: bidirectional sugar transporter N3 [Jatropha curcas]
2 Hb_005532_080 0.0510392464 - - PREDICTED: heparanase-like protein 2 [Jatropha curcas]
3 Hb_142204_010 0.0591984755 - - pyruvate decarboxylase [Saccharum officinarum]
4 Hb_000707_090 0.0598369519 - - PREDICTED: protein NRT1/ PTR FAMILY 5.6-like [Jatropha curcas]
5 Hb_185608_010 0.0648974462 - - hypothetical protein POPTR_0004s22210g [Populus trichocarpa]
6 Hb_000557_080 0.0672685222 - - conserved hypothetical protein [Ricinus communis]
7 Hb_166360_010 0.0679801506 - - hypothetical protein POPTR_0010s12130g [Populus trichocarpa]
8 Hb_068804_190 0.0699310209 - - kinase, putative [Ricinus communis]
9 Hb_049955_010 0.072408743 - - hypothetical protein EUGRSUZ_B00742 [Eucalyptus grandis]
10 Hb_000343_070 0.0736683472 - - hypothetical protein JCGZ_06265 [Jatropha curcas]
11 Hb_162450_010 0.0767299968 - - PREDICTED: glucan endo-1,3-beta-glucosidase 12 [Jatropha curcas]
12 Hb_024723_010 0.0772774174 - - PREDICTED: leucine-rich repeat receptor protein kinase EMS1-like [Jatropha curcas]
13 Hb_000421_040 0.0804400597 - - Peptide transporter, putative [Ricinus communis]
14 Hb_000111_490 0.0832293105 - - conserved hypothetical protein [Ricinus communis]
15 Hb_003858_010 0.0852277963 - - xyloglucan endotransglucosylase/hydrolase [Gossypium hirsutum]
16 Hb_061700_010 0.0871122063 - - PREDICTED: putative UDP-rhamnose:rhamnosyltransferase 1 [Prunus mume]
17 Hb_093084_030 0.0872685577 - - oleosin2 [Plukenetia volubilis]
18 Hb_011344_040 0.0875115725 - - PREDICTED: 21 kDa protein [Jatropha curcas]
19 Hb_000485_100 0.0893574972 - - PREDICTED: putative UPF0481 protein At3g02645 [Populus euphratica]
20 Hb_056506_040 0.0928892734 - - -

Gene co-expression network

sample Hb_007382_110 Hb_007382_110 Hb_005532_080 Hb_005532_080 Hb_007382_110--Hb_005532_080 Hb_142204_010 Hb_142204_010 Hb_007382_110--Hb_142204_010 Hb_000707_090 Hb_000707_090 Hb_007382_110--Hb_000707_090 Hb_185608_010 Hb_185608_010 Hb_007382_110--Hb_185608_010 Hb_000557_080 Hb_000557_080 Hb_007382_110--Hb_000557_080 Hb_166360_010 Hb_166360_010 Hb_007382_110--Hb_166360_010 Hb_068804_190 Hb_068804_190 Hb_005532_080--Hb_068804_190 Hb_005532_080--Hb_166360_010 Hb_011549_040 Hb_011549_040 Hb_005532_080--Hb_011549_040 Hb_056506_040 Hb_056506_040 Hb_005532_080--Hb_056506_040 Hb_162450_010 Hb_162450_010 Hb_005532_080--Hb_162450_010 Hb_152868_020 Hb_152868_020 Hb_142204_010--Hb_152868_020 Hb_142204_010--Hb_000557_080 Hb_061700_010 Hb_061700_010 Hb_142204_010--Hb_061700_010 Hb_103225_040 Hb_103225_040 Hb_142204_010--Hb_103225_040 Hb_003858_010 Hb_003858_010 Hb_142204_010--Hb_003858_010 Hb_000707_090--Hb_000557_080 Hb_000421_040 Hb_000421_040 Hb_000707_090--Hb_000421_040 Hb_001289_040 Hb_001289_040 Hb_000707_090--Hb_001289_040 Hb_000343_070 Hb_000343_070 Hb_000707_090--Hb_000343_070 Hb_006895_010 Hb_006895_010 Hb_000707_090--Hb_006895_010 Hb_057862_010 Hb_057862_010 Hb_185608_010--Hb_057862_010 Hb_185608_010--Hb_162450_010 Hb_049955_010 Hb_049955_010 Hb_185608_010--Hb_049955_010 Hb_011344_040 Hb_011344_040 Hb_185608_010--Hb_011344_040 Hb_185608_010--Hb_003858_010 Hb_000557_080--Hb_001289_040 Hb_094439_040 Hb_094439_040 Hb_000557_080--Hb_094439_040 Hb_064396_020 Hb_064396_020 Hb_000557_080--Hb_064396_020 Hb_077027_010 Hb_077027_010 Hb_000557_080--Hb_077027_010 Hb_166360_010--Hb_068804_190 Hb_166360_010--Hb_011549_040 Hb_166360_010--Hb_162450_010 Hb_004218_270 Hb_004218_270 Hb_166360_010--Hb_004218_270 Hb_000933_030 Hb_000933_030 Hb_166360_010--Hb_000933_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.0458803 0.173733 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0.104597

CAGE analysis