Hb_007403_110

Information

Type -
Description -
Location Contig7403: 81748-83177
Sequence    

Annotation

kegg
ID pxb:103963632
description zinc finger A20 and AN1 domain-containing stress-associated protein 4-like
nr
ID XP_012066479.1
description PREDICTED: zinc finger A20 and AN1 domain-containing stress-associated protein 4-like [Jatropha curcas]
swissprot
ID Q9SJM6
description Zinc finger A20 and AN1 domain-containing stress-associated protein 4 OS=Arabidopsis thaliana GN=SAP4 PE=1 SV=1
trembl
ID A0A067L6B6
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_23668 PE=4 SV=1
Gene Ontology
ID GO:0003677
description zinc finger a20 and an1 domain-containing stress-associated protein 6-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_56378: 81695-98671 , PASA_asmbl_56379: 81729-83078
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_007403_110 0.0 - - PREDICTED: zinc finger A20 and AN1 domain-containing stress-associated protein 4-like [Jatropha curcas]
2 Hb_001377_360 0.0801131662 transcription factor TF Family: ARF PREDICTED: auxin response factor 18 [Jatropha curcas]
3 Hb_000291_030 0.1289027632 - - PREDICTED: mitogen-activated protein kinase kinase kinase 1-like [Eucalyptus grandis]
4 Hb_008695_090 0.1357111596 - - PREDICTED: mitogen-activated protein kinase kinase kinase 1 [Jatropha curcas]
5 Hb_002228_110 0.1378114499 - - cytochrome b5 isoform Cb5-B [Vernicia fordii]
6 Hb_000084_030 0.1392726482 - - conserved hypothetical protein [Ricinus communis]
7 Hb_004724_220 0.1405414481 - - PREDICTED: probable calcium-binding protein CML48 [Jatropha curcas]
8 Hb_003682_030 0.1415616009 - - hypothetical protein CICLE_v10020876mg [Citrus clementina]
9 Hb_185516_010 0.1465408713 - - PREDICTED: alpha/beta hydrolase domain-containing protein 17B [Jatropha curcas]
10 Hb_001477_070 0.1468054742 - - conserved hypothetical protein [Ricinus communis]
11 Hb_000211_120 0.1485620035 - - PREDICTED: INO80 complex subunit D-like [Jatropha curcas]
12 Hb_004635_030 0.1489243941 - - PREDICTED: F-box/kelch-repeat protein At1g57790-like [Jatropha curcas]
13 Hb_000905_210 0.1491027847 - - PREDICTED: protein gar2 [Jatropha curcas]
14 Hb_000465_080 0.1507122556 - - PREDICTED: E3 ubiquitin-protein ligase RBBP6-like [Jatropha curcas]
15 Hb_155599_010 0.1517143375 transcription factor TF Family: C2H2 nucleic acid binding protein, putative [Ricinus communis]
16 Hb_004880_140 0.1537978901 transcription factor TF Family: Orphans PREDICTED: zinc finger protein CONSTANS-LIKE 1 [Jatropha curcas]
17 Hb_000002_240 0.1545293003 - - PREDICTED: transcription factor bHLH104 [Jatropha curcas]
18 Hb_004324_300 0.1546566789 - - hypothetical protein PRUPE_ppa012628mg [Prunus persica]
19 Hb_000407_040 0.1551496857 transcription factor TF Family: C3H zinc finger protein, putative [Ricinus communis]
20 Hb_000925_030 0.1562983365 - - ATP-dependent RNA helicase, putative [Ricinus communis]

Gene co-expression network

sample Hb_007403_110 Hb_007403_110 Hb_001377_360 Hb_001377_360 Hb_007403_110--Hb_001377_360 Hb_000291_030 Hb_000291_030 Hb_007403_110--Hb_000291_030 Hb_008695_090 Hb_008695_090 Hb_007403_110--Hb_008695_090 Hb_002228_110 Hb_002228_110 Hb_007403_110--Hb_002228_110 Hb_000084_030 Hb_000084_030 Hb_007403_110--Hb_000084_030 Hb_004724_220 Hb_004724_220 Hb_007403_110--Hb_004724_220 Hb_001377_360--Hb_004724_220 Hb_001377_360--Hb_000291_030 Hb_001477_070 Hb_001477_070 Hb_001377_360--Hb_001477_070 Hb_004635_030 Hb_004635_030 Hb_001377_360--Hb_004635_030 Hb_001377_360--Hb_002228_110 Hb_000011_050 Hb_000011_050 Hb_000291_030--Hb_000011_050 Hb_002631_320 Hb_002631_320 Hb_000291_030--Hb_002631_320 Hb_000579_190 Hb_000579_190 Hb_000291_030--Hb_000579_190 Hb_000979_060 Hb_000979_060 Hb_000291_030--Hb_000979_060 Hb_000291_030--Hb_004635_030 Hb_004236_030 Hb_004236_030 Hb_000291_030--Hb_004236_030 Hb_004943_030 Hb_004943_030 Hb_008695_090--Hb_004943_030 Hb_000375_290 Hb_000375_290 Hb_008695_090--Hb_000375_290 Hb_003682_030 Hb_003682_030 Hb_008695_090--Hb_003682_030 Hb_000723_110 Hb_000723_110 Hb_008695_090--Hb_000723_110 Hb_001754_030 Hb_001754_030 Hb_008695_090--Hb_001754_030 Hb_000169_080 Hb_000169_080 Hb_008695_090--Hb_000169_080 Hb_004648_090 Hb_004648_090 Hb_002228_110--Hb_004648_090 Hb_001898_240 Hb_001898_240 Hb_002228_110--Hb_001898_240 Hb_002228_110--Hb_003682_030 Hb_006261_090 Hb_006261_090 Hb_002228_110--Hb_006261_090 Hb_001671_040 Hb_001671_040 Hb_002228_110--Hb_001671_040 Hb_001225_030 Hb_001225_030 Hb_002228_110--Hb_001225_030 Hb_002411_030 Hb_002411_030 Hb_000084_030--Hb_002411_030 Hb_006346_040 Hb_006346_040 Hb_000084_030--Hb_006346_040 Hb_003411_110 Hb_003411_110 Hb_000084_030--Hb_003411_110 Hb_003299_030 Hb_003299_030 Hb_000084_030--Hb_003299_030 Hb_000457_050 Hb_000457_050 Hb_000084_030--Hb_000457_050 Hb_000084_030--Hb_001477_070 Hb_004724_220--Hb_000291_030 Hb_005194_020 Hb_005194_020 Hb_004724_220--Hb_005194_020 Hb_004724_220--Hb_004648_090 Hb_004724_220--Hb_000979_060 Hb_004724_220--Hb_004635_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
131.787 302.948 186.284 87.1317 92.2992 76.9108
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
66.7859 143.336 72.6821 35.9549 16.611

CAGE analysis