Hb_007413_020

Information

Type -
Description -
Location Contig7413: 29548-33769
Sequence    

Annotation

kegg
ID rcu:RCOM_1448810
description hypothetical protein
nr
ID XP_002512953.1
description conserved hypothetical protein [Ricinus communis]
swissprot
ID -
description -
trembl
ID B9RH94
description Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1448810 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_007413_020 0.0 - - conserved hypothetical protein [Ricinus communis]
2 Hb_173638_010 0.077237368 - - NBS-LRR resistance protein RGH1 [Manihot esculenta]
3 Hb_000362_140 0.1549373389 transcription factor TF Family: bZIP PREDICTED: basic leucine zipper 61-like [Jatropha curcas]
4 Hb_002942_170 0.2302561041 - - acyl carrier protein, putative [Ricinus communis]
5 Hb_002851_040 0.2418538452 transcription factor TF Family: zf-HD PREDICTED: zinc-finger homeodomain protein 5 [Jatropha curcas]
6 Hb_115832_010 0.2457309675 - - transcription factor, putative [Ricinus communis]
7 Hb_000105_110 0.2469495067 - - hypothetical protein, partial [Fervidibacteria bacterium SCGC AAA471-D06]
8 Hb_007904_050 0.2497315779 - - hypothetical protein JCGZ_17883 [Jatropha curcas]
9 Hb_002811_220 0.2535715754 transcription factor TF Family: Trihelix transcription factor, putative [Ricinus communis]
10 Hb_022425_020 0.2541174861 - - -
11 Hb_001762_050 0.2712372899 - - PREDICTED: xylem cysteine proteinase 1 [Jatropha curcas]
12 Hb_115823_010 0.2753770339 - - conserved hypothetical protein [Ricinus communis]
13 Hb_002343_030 0.2805237274 - - conserved hypothetical protein [Ricinus communis]
14 Hb_007617_040 0.281514417 - - PREDICTED: syntaxin-112-like [Jatropha curcas]
15 Hb_001301_140 0.2832240605 - - PREDICTED: TMV resistance protein N-like [Jatropha curcas]
16 Hb_001329_010 0.2896489814 - - zinc finger protein, putative [Ricinus communis]
17 Hb_004079_090 0.2926498485 - - hypothetical protein RCOM_1053120 [Ricinus communis]
18 Hb_000107_670 0.2930095786 transcription factor TF Family: MIKC floral homeotic protein AGAMOUS [Jatropha curcas]
19 Hb_002636_140 0.2964579958 - - PREDICTED: GDSL esterase/lipase At1g71691-like [Populus euphratica]
20 Hb_000723_070 0.2973785983 - - PREDICTED: thylakoid lumenal 15.0 kDa protein 2, chloroplastic isoform X1 [Jatropha curcas]

Gene co-expression network

sample Hb_007413_020 Hb_007413_020 Hb_173638_010 Hb_173638_010 Hb_007413_020--Hb_173638_010 Hb_000362_140 Hb_000362_140 Hb_007413_020--Hb_000362_140 Hb_002942_170 Hb_002942_170 Hb_007413_020--Hb_002942_170 Hb_002851_040 Hb_002851_040 Hb_007413_020--Hb_002851_040 Hb_115832_010 Hb_115832_010 Hb_007413_020--Hb_115832_010 Hb_000105_110 Hb_000105_110 Hb_007413_020--Hb_000105_110 Hb_173638_010--Hb_000362_140 Hb_173638_010--Hb_002942_170 Hb_022425_020 Hb_022425_020 Hb_173638_010--Hb_022425_020 Hb_007904_050 Hb_007904_050 Hb_173638_010--Hb_007904_050 Hb_002811_220 Hb_002811_220 Hb_173638_010--Hb_002811_220 Hb_007120_020 Hb_007120_020 Hb_000362_140--Hb_007120_020 Hb_000763_030 Hb_000763_030 Hb_000362_140--Hb_000763_030 Hb_001123_180 Hb_001123_180 Hb_000362_140--Hb_001123_180 Hb_137288_010 Hb_137288_010 Hb_000362_140--Hb_137288_010 Hb_001329_010 Hb_001329_010 Hb_002942_170--Hb_001329_010 Hb_002942_170--Hb_002811_220 Hb_002942_170--Hb_022425_020 Hb_002942_170--Hb_007904_050 Hb_001366_280 Hb_001366_280 Hb_002942_170--Hb_001366_280 Hb_004079_090 Hb_004079_090 Hb_002851_040--Hb_004079_090 Hb_011457_120 Hb_011457_120 Hb_002851_040--Hb_011457_120 Hb_059567_010 Hb_059567_010 Hb_002851_040--Hb_059567_010 Hb_000020_040 Hb_000020_040 Hb_002851_040--Hb_000020_040 Hb_002851_040--Hb_002811_220 Hb_001347_030 Hb_001347_030 Hb_002851_040--Hb_001347_030 Hb_183671_010 Hb_183671_010 Hb_115832_010--Hb_183671_010 Hb_005601_030 Hb_005601_030 Hb_115832_010--Hb_005601_030 Hb_006663_110 Hb_006663_110 Hb_115832_010--Hb_006663_110 Hb_000345_180 Hb_000345_180 Hb_115832_010--Hb_000345_180 Hb_001391_050 Hb_001391_050 Hb_115832_010--Hb_001391_050 Hb_007617_040 Hb_007617_040 Hb_115832_010--Hb_007617_040 Hb_002343_030 Hb_002343_030 Hb_000105_110--Hb_002343_030 Hb_000723_070 Hb_000723_070 Hb_000105_110--Hb_000723_070 Hb_000302_070 Hb_000302_070 Hb_000105_110--Hb_000302_070 Hb_093385_010 Hb_093385_010 Hb_000105_110--Hb_093385_010 Hb_000105_110--Hb_005601_030 Hb_000105_110--Hb_007617_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.083295 0 0.41255 0.257536 0 0.075856
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0

CAGE analysis