Hb_007413_030

Information

Type -
Description -
Location Contig7413: 35832-38339
Sequence    

Annotation

kegg
ID rcu:RCOM_1448800
description kinase, putative (EC:2.7.10.2)
nr
ID XP_002512952.1
description kinase, putative [Ricinus communis]
swissprot
ID Q9T020
description Probable receptor-like protein kinase At4g39110 OS=Arabidopsis thaliana GN=At4g39110 PE=3 SV=1
trembl
ID B9RH93
description Kinase, putative OS=Ricinus communis GN=RCOM_1448800 PE=3 SV=1
Gene Ontology
ID GO:0004674
description probable receptor-like protein kinase at4g39110

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_56392: 38886-42178
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_007413_030 0.0 - - kinase, putative [Ricinus communis]
2 Hb_063718_010 0.1754228515 - - conserved hypothetical protein [Ricinus communis]
3 Hb_005779_090 0.1777631972 transcription factor TF Family: ERF hypothetical protein POPTR_0014s05500g [Populus trichocarpa]
4 Hb_002835_090 0.1845726262 - - RecName: Full=Elongation factor Tu, chloroplastic; Short=EF-Tu; Flags: Precursor [Glycine max]
5 Hb_003333_040 0.1891479009 - - ankyrin repeat-containing protein, putative [Ricinus communis]
6 Hb_010068_090 0.1983349693 - - hypothetical protein JCGZ_00885 [Jatropha curcas]
7 Hb_000439_020 0.2003906385 transcription factor TF Family: ERF PREDICTED: dehydration-responsive element-binding protein 3-like [Jatropha curcas]
8 Hb_007595_050 0.202776154 - - hypothetical chloroplast RF2 [Hevea brasiliensis]
9 Hb_003427_080 0.2043177698 - - PREDICTED: probable alanine--tRNA ligase, chloroplastic [Jatropha curcas]
10 Hb_000053_120 0.2051189566 - - PREDICTED: protein CHUP1, chloroplastic [Jatropha curcas]
11 Hb_000069_370 0.2052302195 - - -
12 Hb_002681_080 0.205413673 - - PREDICTED: uncharacterized protein LOC105633817 isoform X1 [Jatropha curcas]
13 Hb_003944_010 0.2063611035 - - PREDICTED: receptor-like protein kinase HSL1 [Jatropha curcas]
14 Hb_000038_020 0.2076456427 - - PREDICTED: ATP-dependent zinc metalloprotease FTSH 2, chloroplastic [Jatropha curcas]
15 Hb_001266_160 0.2110197661 - - PREDICTED: pheophytinase, chloroplastic [Jatropha curcas]
16 Hb_002894_090 0.2130687668 - - PREDICTED: heparan-alpha-glucosaminide N-acetyltransferase [Jatropha curcas]
17 Hb_001377_060 0.2139610726 - - PREDICTED: pentatricopeptide repeat-containing protein At4g01030, mitochondrial [Jatropha curcas]
18 Hb_004712_200 0.2148436638 - - hypothetical protein CICLE_v10010292mg [Citrus clementina]
19 Hb_004713_020 0.2160298413 - - -
20 Hb_000029_380 0.2174143649 - - conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_007413_030 Hb_007413_030 Hb_063718_010 Hb_063718_010 Hb_007413_030--Hb_063718_010 Hb_005779_090 Hb_005779_090 Hb_007413_030--Hb_005779_090 Hb_002835_090 Hb_002835_090 Hb_007413_030--Hb_002835_090 Hb_003333_040 Hb_003333_040 Hb_007413_030--Hb_003333_040 Hb_010068_090 Hb_010068_090 Hb_007413_030--Hb_010068_090 Hb_000439_020 Hb_000439_020 Hb_007413_030--Hb_000439_020 Hb_004979_050 Hb_004979_050 Hb_063718_010--Hb_004979_050 Hb_000227_100 Hb_000227_100 Hb_063718_010--Hb_000227_100 Hb_007595_020 Hb_007595_020 Hb_063718_010--Hb_007595_020 Hb_003944_010 Hb_003944_010 Hb_063718_010--Hb_003944_010 Hb_007595_050 Hb_007595_050 Hb_063718_010--Hb_007595_050 Hb_005228_060 Hb_005228_060 Hb_063718_010--Hb_005228_060 Hb_005779_090--Hb_003944_010 Hb_000359_160 Hb_000359_160 Hb_005779_090--Hb_000359_160 Hb_005779_090--Hb_063718_010 Hb_013420_060 Hb_013420_060 Hb_005779_090--Hb_013420_060 Hb_004117_320 Hb_004117_320 Hb_005779_090--Hb_004117_320 Hb_001377_060 Hb_001377_060 Hb_002835_090--Hb_001377_060 Hb_000029_330 Hb_000029_330 Hb_002835_090--Hb_000029_330 Hb_011900_020 Hb_011900_020 Hb_002835_090--Hb_011900_020 Hb_000359_070 Hb_000359_070 Hb_002835_090--Hb_000359_070 Hb_002835_090--Hb_007595_050 Hb_000069_370 Hb_000069_370 Hb_002835_090--Hb_000069_370 Hb_003333_040--Hb_013420_060 Hb_001671_090 Hb_001671_090 Hb_003333_040--Hb_001671_090 Hb_032733_020 Hb_032733_020 Hb_003333_040--Hb_032733_020 Hb_053998_020 Hb_053998_020 Hb_003333_040--Hb_053998_020 Hb_114271_010 Hb_114271_010 Hb_003333_040--Hb_114271_010 Hb_010068_090--Hb_000029_330 Hb_000317_180 Hb_000317_180 Hb_010068_090--Hb_000317_180 Hb_011649_010 Hb_011649_010 Hb_010068_090--Hb_011649_010 Hb_010068_090--Hb_007595_050 Hb_010068_090--Hb_002835_090 Hb_001266_160 Hb_001266_160 Hb_010068_090--Hb_001266_160 Hb_004712_200 Hb_004712_200 Hb_000439_020--Hb_004712_200 Hb_006483_120 Hb_006483_120 Hb_000439_020--Hb_006483_120 Hb_010620_030 Hb_010620_030 Hb_000439_020--Hb_010620_030 Hb_010174_100 Hb_010174_100 Hb_000439_020--Hb_010174_100 Hb_000552_010 Hb_000552_010 Hb_000439_020--Hb_000552_010 Hb_042463_010 Hb_042463_010 Hb_000439_020--Hb_042463_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0657613 0.0447454 0.0883581 0.11534 0.0145222 0.0641039
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0176072 0 0.0264144 0.00550171 0.530143

CAGE analysis