Hb_007420_020

Information

Type -
Description -
Location Contig7420: 29277-32701
Sequence    

Annotation

kegg
ID rcu:RCOM_0574920
description kinase, putative (EC:2.7.10.1)
nr
ID XP_012066189.1
description PREDICTED: probable receptor-like protein kinase At1g67000 [Jatropha curcas]
swissprot
ID D7SFH9
description Glycerophosphodiester phosphodiesterase protein kinase domain-containing GDPDL2 OS=Arabidopsis thaliana GN=GDPDL2 PE=1 SV=1
trembl
ID A0A067L2Z5
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_23768 PE=3 SV=1
Gene Ontology
ID GO:0004674
description probable receptor-like protein kinase at1g67000

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_007420_020 0.0 - - PREDICTED: probable receptor-like protein kinase At1g67000 [Jatropha curcas]
2 Hb_114310_050 0.0562980163 - - Iron(III)-zinc(II) purple acid phosphatase precursor family protein [Populus trichocarpa]
3 Hb_005054_280 0.066118682 transcription factor TF Family: HB Protein WUSCHEL, putative [Ricinus communis]
4 Hb_000614_190 0.0763431159 desease resistance Gene Name: ABC_membrane PREDICTED: putative ABC transporter C family member 15 [Jatropha curcas]
5 Hb_007420_010 0.0781825096 - - PREDICTED: probable receptor-like protein kinase At1g67000 isoform X2 [Jatropha curcas]
6 Hb_123560_050 0.094770278 - - PREDICTED: probable receptor-like protein kinase At5g24010 [Jatropha curcas]
7 Hb_026144_030 0.0961828951 - - PREDICTED: high affinity nitrate transporter 2.5 [Jatropha curcas]
8 Hb_000085_220 0.1026468373 - - conserved hypothetical protein [Ricinus communis]
9 Hb_000501_040 0.1028885833 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
10 Hb_001369_070 0.1055571319 - - unnamed protein product [Vitis vinifera]
11 Hb_167272_010 0.105994041 - - PREDICTED: probable leucine-rich repeat receptor-like protein kinase At1g35710 [Vitis vinifera]
12 Hb_001819_010 0.1065109002 - - PREDICTED: potassium transporter 8 [Jatropha curcas]
13 Hb_006269_010 0.1078174131 - - hypothetical protein JCGZ_21552 [Jatropha curcas]
14 Hb_001153_090 0.1083675662 - - PREDICTED: protein FAM63A [Jatropha curcas]
15 Hb_023344_130 0.1106406371 desease resistance Gene Name: ABC_membrane ABC transporter family protein [Hevea brasiliensis]
16 Hb_004306_140 0.112436607 - - calcineurin-like phosphoesterase [Manihot esculenta]
17 Hb_000037_010 0.1127302384 - - PREDICTED: cation/H(+) antiporter 18-like [Jatropha curcas]
18 Hb_001174_030 0.1132127978 - - unnamed protein product [Vitis vinifera]
19 Hb_138606_020 0.1132735246 - - Nitrate transporter2.5 [Theobroma cacao]
20 Hb_008111_010 0.1137085509 - - hypothetical protein VITISV_021527 [Vitis vinifera]

Gene co-expression network

sample Hb_007420_020 Hb_007420_020 Hb_114310_050 Hb_114310_050 Hb_007420_020--Hb_114310_050 Hb_005054_280 Hb_005054_280 Hb_007420_020--Hb_005054_280 Hb_000614_190 Hb_000614_190 Hb_007420_020--Hb_000614_190 Hb_007420_010 Hb_007420_010 Hb_007420_020--Hb_007420_010 Hb_123560_050 Hb_123560_050 Hb_007420_020--Hb_123560_050 Hb_026144_030 Hb_026144_030 Hb_007420_020--Hb_026144_030 Hb_114310_050--Hb_005054_280 Hb_114310_050--Hb_000614_190 Hb_114310_050--Hb_007420_010 Hb_004306_140 Hb_004306_140 Hb_114310_050--Hb_004306_140 Hb_001515_030 Hb_001515_030 Hb_114310_050--Hb_001515_030 Hb_005054_280--Hb_000614_190 Hb_003562_040 Hb_003562_040 Hb_005054_280--Hb_003562_040 Hb_005034_010 Hb_005034_010 Hb_005054_280--Hb_005034_010 Hb_008111_010 Hb_008111_010 Hb_005054_280--Hb_008111_010 Hb_000614_190--Hb_026144_030 Hb_000614_190--Hb_005034_010 Hb_001174_030 Hb_001174_030 Hb_000614_190--Hb_001174_030 Hb_167272_010 Hb_167272_010 Hb_007420_010--Hb_167272_010 Hb_000501_040 Hb_000501_040 Hb_007420_010--Hb_000501_040 Hb_009803_030 Hb_009803_030 Hb_007420_010--Hb_009803_030 Hb_007420_010--Hb_001515_030 Hb_001819_010 Hb_001819_010 Hb_123560_050--Hb_001819_010 Hb_000377_160 Hb_000377_160 Hb_123560_050--Hb_000377_160 Hb_003077_140 Hb_003077_140 Hb_123560_050--Hb_003077_140 Hb_029866_110 Hb_029866_110 Hb_123560_050--Hb_029866_110 Hb_123560_050--Hb_026144_030 Hb_026144_030--Hb_008111_010 Hb_000767_010 Hb_000767_010 Hb_026144_030--Hb_000767_010 Hb_001143_140 Hb_001143_140 Hb_026144_030--Hb_001143_140
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0689962 0.0270255 0.0365642 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.0509675 0.0448075

CAGE analysis