Hb_007426_110

Information

Type -
Description -
Location Contig7426: 110569-114960
Sequence    

Annotation

kegg
ID rcu:RCOM_0631350
description hypothetical protein
nr
ID XP_012072127.1
description PREDICTED: vacuolar fusion protein CCZ1 homolog isoform X2 [Jatropha curcas]
swissprot
ID A7RJI7
description Vacuolar fusion protein CCZ1 homolog OS=Nematostella vectensis GN=v1g238755 PE=3 SV=1
trembl
ID A0A067L1L1
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_04637 PE=4 SV=1
Gene Ontology
ID GO:0016301
description vacuolar fusion protein ccz1 homolog isoform x2

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_56543: 110576-114901
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_007426_110 0.0 - - PREDICTED: vacuolar fusion protein CCZ1 homolog isoform X2 [Jatropha curcas]
2 Hb_006483_110 0.0447074082 - - PREDICTED: RNA-binding protein Musashi homolog 1 [Jatropha curcas]
3 Hb_028960_020 0.052518019 - - PREDICTED: uncharacterized protein LOC105646163 isoform X1 [Jatropha curcas]
4 Hb_008387_020 0.0536105353 - - PREDICTED: FHA domain-containing protein DDL isoform X1 [Jatropha curcas]
5 Hb_002218_090 0.0573707381 - - Poly(rC)-binding protein, putative [Ricinus communis]
6 Hb_002263_020 0.0573743017 - - PREDICTED: DEAD-box ATP-dependent RNA helicase 11-like [Jatropha curcas]
7 Hb_001655_030 0.0595083642 transcription factor TF Family: SNF2 PREDICTED: SNF2 domain-containing protein CLASSY 3 isoform X2 [Jatropha curcas]
8 Hb_003517_040 0.0596867795 - - PREDICTED: putative DUF21 domain-containing protein At3g13070, chloroplastic [Jatropha curcas]
9 Hb_009270_020 0.0601630988 - - PREDICTED: LOW QUALITY PROTEIN: helicase and polymerase-containing protein TEBICHI [Jatropha curcas]
10 Hb_000890_060 0.0604054211 - - PREDICTED: sucrose nonfermenting 4-like protein [Jatropha curcas]
11 Hb_000138_100 0.0611244398 - - bifunctional purine biosynthesis protein, putative [Ricinus communis]
12 Hb_012733_030 0.0624995389 - - hypothetical protein OsI_15243 [Oryza sativa Indica Group]
13 Hb_020378_030 0.0638490803 - - PREDICTED: protein transport protein SEC31 homolog B [Jatropha curcas]
14 Hb_001814_030 0.063902874 - - PREDICTED: uncharacterized protein LOC105650634 [Jatropha curcas]
15 Hb_003734_010 0.0650542853 - - PREDICTED: double-strand break repair protein MRE11 [Jatropha curcas]
16 Hb_004846_220 0.0664055867 - - PREDICTED: probable protein phosphatase 2C 11 isoform X1 [Jatropha curcas]
17 Hb_002600_150 0.0670609719 - - PREDICTED: uncharacterized protein LOC105646805 isoform X1 [Jatropha curcas]
18 Hb_011231_020 0.0677388913 - - PREDICTED: proline-, glutamic acid- and leucine-rich protein 1 isoform X2 [Jatropha curcas]
19 Hb_000008_290 0.0685436429 - - PREDICTED: protein SAND [Jatropha curcas]
20 Hb_000039_150 0.0688867957 - - PREDICTED: lysine-specific demethylase JMJ25 isoform X1 [Jatropha curcas]

Gene co-expression network

sample Hb_007426_110 Hb_007426_110 Hb_006483_110 Hb_006483_110 Hb_007426_110--Hb_006483_110 Hb_028960_020 Hb_028960_020 Hb_007426_110--Hb_028960_020 Hb_008387_020 Hb_008387_020 Hb_007426_110--Hb_008387_020 Hb_002218_090 Hb_002218_090 Hb_007426_110--Hb_002218_090 Hb_002263_020 Hb_002263_020 Hb_007426_110--Hb_002263_020 Hb_001655_030 Hb_001655_030 Hb_007426_110--Hb_001655_030 Hb_006483_110--Hb_028960_020 Hb_015807_050 Hb_015807_050 Hb_006483_110--Hb_015807_050 Hb_041290_020 Hb_041290_020 Hb_006483_110--Hb_041290_020 Hb_006483_110--Hb_002263_020 Hb_109980_010 Hb_109980_010 Hb_006483_110--Hb_109980_010 Hb_001348_080 Hb_001348_080 Hb_028960_020--Hb_001348_080 Hb_002205_030 Hb_002205_030 Hb_028960_020--Hb_002205_030 Hb_000797_040 Hb_000797_040 Hb_028960_020--Hb_000797_040 Hb_004846_220 Hb_004846_220 Hb_028960_020--Hb_004846_220 Hb_000749_090 Hb_000749_090 Hb_008387_020--Hb_000749_090 Hb_003517_040 Hb_003517_040 Hb_008387_020--Hb_003517_040 Hb_008387_020--Hb_028960_020 Hb_188281_040 Hb_188281_040 Hb_008387_020--Hb_188281_040 Hb_000568_050 Hb_000568_050 Hb_008387_020--Hb_000568_050 Hb_000343_250 Hb_000343_250 Hb_002218_090--Hb_000343_250 Hb_007765_100 Hb_007765_100 Hb_002218_090--Hb_007765_100 Hb_000329_370 Hb_000329_370 Hb_002218_090--Hb_000329_370 Hb_002218_090--Hb_006483_110 Hb_005867_070 Hb_005867_070 Hb_002218_090--Hb_005867_070 Hb_000138_100 Hb_000138_100 Hb_002263_020--Hb_000138_100 Hb_001902_030 Hb_001902_030 Hb_002263_020--Hb_001902_030 Hb_002592_060 Hb_002592_060 Hb_002263_020--Hb_002592_060 Hb_002263_020--Hb_003517_040 Hb_004109_080 Hb_004109_080 Hb_002263_020--Hb_004109_080 Hb_006501_090 Hb_006501_090 Hb_001655_030--Hb_006501_090 Hb_011231_020 Hb_011231_020 Hb_001655_030--Hb_011231_020 Hb_001814_030 Hb_001814_030 Hb_001655_030--Hb_001814_030 Hb_003645_060 Hb_003645_060 Hb_001655_030--Hb_003645_060 Hb_000890_060 Hb_000890_060 Hb_001655_030--Hb_000890_060
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
14.5486 13.1723 15.3713 13.1042 14.4741 17.8923
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
11.8772 10.8805 13.0987 19.1587 21.7937

CAGE analysis