Hb_007426_180

Information

Type -
Description -
Location Contig7426: 208473-212397
Sequence    

Annotation

kegg
ID tcc:TCM_029440
description Inositol transporter 2 isoform 1
nr
ID XP_012072144.1
description PREDICTED: probable inositol transporter 2 [Jatropha curcas]
swissprot
ID Q9C757
description Probable inositol transporter 2 OS=Arabidopsis thaliana GN=INT2 PE=1 SV=1
trembl
ID A0A067KP43
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_04644 PE=3 SV=1
Gene Ontology
ID GO:0016021
description probable inositol transporter 2

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_56559: 208542-212190
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_007426_180 0.0 - - PREDICTED: probable inositol transporter 2 [Jatropha curcas]
2 Hb_005551_050 0.076798747 - - PREDICTED: nudix hydrolase 27, chloroplastic [Jatropha curcas]
3 Hb_000679_090 0.0833517718 - - PREDICTED: pentatricopeptide repeat-containing protein At4g21065-like [Jatropha curcas]
4 Hb_001552_020 0.0870948337 - - PREDICTED: uncharacterized protein LOC105639653 [Jatropha curcas]
5 Hb_000500_100 0.0872826723 - - peptide methionine sulfoxide reductase A1-like [Jatropha curcas]
6 Hb_002256_030 0.0901855997 - - conserved hypothetical protein [Ricinus communis]
7 Hb_003376_350 0.0921016172 - - PREDICTED: CASP-like protein 5A1 isoform X1 [Jatropha curcas]
8 Hb_028995_040 0.096546399 - - PREDICTED: protein MODIFIER OF SNC1 11 isoform X1 [Jatropha curcas]
9 Hb_000915_090 0.09703602 - - PREDICTED: transcription initiation factor TFIID subunit 14b [Jatropha curcas]
10 Hb_029866_090 0.0986777693 - - PREDICTED: uncharacterized protein LOC105648377 [Jatropha curcas]
11 Hb_004032_360 0.1002105598 - - PREDICTED: uncharacterized protein LOC103403885 [Malus domestica]
12 Hb_002016_150 0.1011921225 - - PREDICTED: uncharacterized protein LOC105642512 [Jatropha curcas]
13 Hb_002284_010 0.1037366024 - - conserved hypothetical protein [Ricinus communis]
14 Hb_001195_600 0.1037938644 transcription factor TF Family: BES1 BRASSINAZOLE-RESISTANT 1 protein, putative [Ricinus communis]
15 Hb_000676_180 0.1050903907 - - Ubiquitin-conjugating enzyme 16 [Theobroma cacao]
16 Hb_005653_060 0.1055920658 - - PREDICTED: zinc finger A20 and AN1 domain-containing stress-associated protein 3 [Jatropha curcas]
17 Hb_008725_260 0.1056465906 - - PREDICTED: uncharacterized protein LOC105642597 [Jatropha curcas]
18 Hb_002163_020 0.1078650994 transcription factor TF Family: PHD PREDICTED: BAH and coiled-coil domain-containing protein 1-like [Jatropha curcas]
19 Hb_029866_060 0.1082142663 - - hypothetical protein PRUPE_ppa012628mg [Prunus persica]
20 Hb_031527_040 0.1088097909 transcription factor TF Family: FAR1 PREDICTED: protein FAR1-RELATED SEQUENCE 5 isoform X1 [Jatropha curcas]

Gene co-expression network

sample Hb_007426_180 Hb_007426_180 Hb_005551_050 Hb_005551_050 Hb_007426_180--Hb_005551_050 Hb_000679_090 Hb_000679_090 Hb_007426_180--Hb_000679_090 Hb_001552_020 Hb_001552_020 Hb_007426_180--Hb_001552_020 Hb_000500_100 Hb_000500_100 Hb_007426_180--Hb_000500_100 Hb_002256_030 Hb_002256_030 Hb_007426_180--Hb_002256_030 Hb_003376_350 Hb_003376_350 Hb_007426_180--Hb_003376_350 Hb_005551_050--Hb_003376_350 Hb_005653_060 Hb_005653_060 Hb_005551_050--Hb_005653_060 Hb_005551_050--Hb_000679_090 Hb_001564_080 Hb_001564_080 Hb_005551_050--Hb_001564_080 Hb_004032_270 Hb_004032_270 Hb_005551_050--Hb_004032_270 Hb_000696_150 Hb_000696_150 Hb_000679_090--Hb_000696_150 Hb_004994_140 Hb_004994_140 Hb_000679_090--Hb_004994_140 Hb_000679_090--Hb_003376_350 Hb_012107_060 Hb_012107_060 Hb_000679_090--Hb_012107_060 Hb_000117_090 Hb_000117_090 Hb_000679_090--Hb_000117_090 Hb_028995_040 Hb_028995_040 Hb_001552_020--Hb_028995_040 Hb_029866_090 Hb_029866_090 Hb_001552_020--Hb_029866_090 Hb_002739_100 Hb_002739_100 Hb_001552_020--Hb_002739_100 Hb_000656_400 Hb_000656_400 Hb_001552_020--Hb_000656_400 Hb_001552_020--Hb_002256_030 Hb_002346_020 Hb_002346_020 Hb_001552_020--Hb_002346_020 Hb_005116_160 Hb_005116_160 Hb_000500_100--Hb_005116_160 Hb_000500_100--Hb_001552_020 Hb_002184_110 Hb_002184_110 Hb_000500_100--Hb_002184_110 Hb_005463_100 Hb_005463_100 Hb_000500_100--Hb_005463_100 Hb_000500_100--Hb_002256_030 Hb_036790_100 Hb_036790_100 Hb_002256_030--Hb_036790_100 Hb_031527_040 Hb_031527_040 Hb_002256_030--Hb_031527_040 Hb_004032_360 Hb_004032_360 Hb_002256_030--Hb_004032_360 Hb_001242_060 Hb_001242_060 Hb_002256_030--Hb_001242_060 Hb_002256_030--Hb_002739_100 Hb_004907_110 Hb_004907_110 Hb_003376_350--Hb_004907_110 Hb_002631_060 Hb_002631_060 Hb_003376_350--Hb_002631_060 Hb_000926_330 Hb_000926_330 Hb_003376_350--Hb_000926_330 Hb_003376_350--Hb_004994_140 Hb_000189_560 Hb_000189_560 Hb_003376_350--Hb_000189_560 Hb_007532_030 Hb_007532_030 Hb_003376_350--Hb_007532_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
113.046 125.01 62.6944 45.8231 83.8402 67.3203
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
140.51 166.813 140.777 40.9237 53.1663

CAGE analysis