Hb_007432_030

Information

Type -
Description -
Location Contig7432: 16840-20053
Sequence    

Annotation

kegg
ID rcu:RCOM_1308960
description acyl-CoA thioesterase, putative
nr
ID XP_002526988.1
description acyl-CoA thioesterase, putative [Ricinus communis]
swissprot
ID Q55116
description Putative esterase sll0410 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=sll0410 PE=3 SV=1
trembl
ID B9SLW9
description Acyl-CoA thioesterase, putative OS=Ricinus communis GN=RCOM_1308960 PE=4 SV=1
Gene Ontology
ID GO:0016787
description thioesterase-like protein

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_007432_030 0.0 - - acyl-CoA thioesterase, putative [Ricinus communis]
2 Hb_001277_070 0.0974940689 - - PREDICTED: guanine nucleotide-binding protein subunit gamma 2 isoform X1 [Jatropha curcas]
3 Hb_003607_150 0.1032153247 - - PREDICTED: thioredoxin-like protein 4B [Jatropha curcas]
4 Hb_002685_040 0.1060464316 - - hypothetical protein CICLE_v10017252mg [Citrus clementina]
5 Hb_004931_090 0.1133995068 - - PREDICTED: chromatin modification-related protein MEAF6-like isoform X2 [Jatropha curcas]
6 Hb_165132_010 0.1157252126 - - PREDICTED: uncharacterized protein LOC105134496 [Populus euphratica]
7 Hb_112798_030 0.1189638683 - - conserved hypothetical protein [Ricinus communis]
8 Hb_001662_070 0.1193182195 - - PREDICTED: thiol-disulfide oxidoreductase LTO1 [Jatropha curcas]
9 Hb_001269_680 0.1220780279 - - PREDICTED: uncharacterized protein LOC105132670 isoform X2 [Populus euphratica]
10 Hb_002188_130 0.1220859563 - - PREDICTED: uncharacterized protein LOC105650815 isoform X2 [Jatropha curcas]
11 Hb_015057_060 0.1223677954 - - -
12 Hb_004934_110 0.1230329594 transcription factor TF Family: HMG hypothetical protein B456_002G115100 [Gossypium raimondii]
13 Hb_001504_100 0.1240200431 - - PREDICTED: uncharacterized protein At2g39795, mitochondrial-like [Jatropha curcas]
14 Hb_002234_070 0.1243031444 - - PREDICTED: polynucleotide 5'-hydroxyl-kinase nol9 isoform X1 [Jatropha curcas]
15 Hb_007778_030 0.1244853873 transcription factor TF Family: mTERF conserved hypothetical protein [Ricinus communis]
16 Hb_005433_040 0.1249019746 - - PREDICTED: U-box domain-containing protein 11-like [Jatropha curcas]
17 Hb_007441_330 0.1263032322 - - PREDICTED: acyl carrier protein 1, mitochondrial [Jatropha curcas]
18 Hb_012505_010 0.126906381 - - mak, putative [Ricinus communis]
19 Hb_129204_030 0.1273303389 - - PREDICTED: vacuolar protein sorting-associated protein 32 homolog 2 [Jatropha curcas]
20 Hb_001328_040 0.1276706547 - - PREDICTED: uncharacterized protein LOC105636146 [Jatropha curcas]

Gene co-expression network

sample Hb_007432_030 Hb_007432_030 Hb_001277_070 Hb_001277_070 Hb_007432_030--Hb_001277_070 Hb_003607_150 Hb_003607_150 Hb_007432_030--Hb_003607_150 Hb_002685_040 Hb_002685_040 Hb_007432_030--Hb_002685_040 Hb_004931_090 Hb_004931_090 Hb_007432_030--Hb_004931_090 Hb_165132_010 Hb_165132_010 Hb_007432_030--Hb_165132_010 Hb_112798_030 Hb_112798_030 Hb_007432_030--Hb_112798_030 Hb_012505_010 Hb_012505_010 Hb_001277_070--Hb_012505_010 Hb_000608_370 Hb_000608_370 Hb_001277_070--Hb_000608_370 Hb_011224_110 Hb_011224_110 Hb_001277_070--Hb_011224_110 Hb_129204_030 Hb_129204_030 Hb_001277_070--Hb_129204_030 Hb_003581_150 Hb_003581_150 Hb_001277_070--Hb_003581_150 Hb_153112_020 Hb_153112_020 Hb_001277_070--Hb_153112_020 Hb_005186_050 Hb_005186_050 Hb_003607_150--Hb_005186_050 Hb_003069_010 Hb_003069_010 Hb_003607_150--Hb_003069_010 Hb_000251_070 Hb_000251_070 Hb_003607_150--Hb_000251_070 Hb_003607_150--Hb_002685_040 Hb_007154_020 Hb_007154_020 Hb_003607_150--Hb_007154_020 Hb_028841_030 Hb_028841_030 Hb_003607_150--Hb_028841_030 Hb_002685_040--Hb_005186_050 Hb_001832_060 Hb_001832_060 Hb_002685_040--Hb_001832_060 Hb_001662_070 Hb_001662_070 Hb_002685_040--Hb_001662_070 Hb_004195_270 Hb_004195_270 Hb_002685_040--Hb_004195_270 Hb_000622_180 Hb_000622_180 Hb_002685_040--Hb_000622_180 Hb_000510_110 Hb_000510_110 Hb_004931_090--Hb_000510_110 Hb_004657_050 Hb_004657_050 Hb_004931_090--Hb_004657_050 Hb_004931_090--Hb_165132_010 Hb_004934_110 Hb_004934_110 Hb_004931_090--Hb_004934_110 Hb_002686_020 Hb_002686_020 Hb_004931_090--Hb_002686_020 Hb_001540_010 Hb_001540_010 Hb_004931_090--Hb_001540_010 Hb_134949_020 Hb_134949_020 Hb_165132_010--Hb_134949_020 Hb_165132_010--Hb_001662_070 Hb_002874_190 Hb_002874_190 Hb_165132_010--Hb_002874_190 Hb_033594_110 Hb_033594_110 Hb_165132_010--Hb_033594_110 Hb_002518_050 Hb_002518_050 Hb_165132_010--Hb_002518_050 Hb_002864_050 Hb_002864_050 Hb_165132_010--Hb_002864_050 Hb_011571_010 Hb_011571_010 Hb_112798_030--Hb_011571_010 Hb_112798_030--Hb_153112_020 Hb_000331_080 Hb_000331_080 Hb_112798_030--Hb_000331_080 Hb_112798_030--Hb_004931_090 Hb_008878_030 Hb_008878_030 Hb_112798_030--Hb_008878_030 Hb_112798_030--Hb_011224_110
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
10.3451 1.84367 6.09896 3.54529 2.68703 4.6379
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
9.04291 10.7094 8.73514 2.0967 2.44782

CAGE analysis