Hb_007432_080

Information

Type -
Description -
Location Contig7432: 70525-75037
Sequence    

Annotation

kegg
ID rcu:RCOM_1309320
description mannose-6-phosphate isomerase, putative (EC:5.3.1.8)
nr
ID XP_012082118.1
description PREDICTED: mannose-6-phosphate isomerase 1-like [Jatropha curcas]
swissprot
ID Q9FZH5
description Mannose-6-phosphate isomerase 2 OS=Arabidopsis thaliana GN=PMI2 PE=1 SV=1
trembl
ID A0A067JZM8
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_18357 PE=3 SV=1
Gene Ontology
ID GO:0004476
description mannose-6-phosphate isomerase 1-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_56574: 73436-74068
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_007432_080 0.0 - - PREDICTED: mannose-6-phosphate isomerase 1-like [Jatropha curcas]
2 Hb_000163_160 0.0763546167 - - Putative small nuclear ribonucleoprotein Sm D2 [Glycine soja]
3 Hb_010180_020 0.0834160218 - - hypothetical protein glysoja_030394 [Glycine soja]
4 Hb_001279_310 0.0862471451 - - hypothetical protein JCGZ_10212 [Jatropha curcas]
5 Hb_001279_070 0.0866796843 - - PREDICTED: uncharacterized protein LOC105633300 [Jatropha curcas]
6 Hb_004306_020 0.0868231757 - - PREDICTED: ankyrin repeat and SAM domain-containing protein 6 [Jatropha curcas]
7 Hb_168054_010 0.0889051697 - - PREDICTED: peptidyl-prolyl cis-trans isomerase CYP18-1 [Elaeis guineensis]
8 Hb_010407_040 0.0924191784 - - PREDICTED: uncharacterized protein At4g14342 isoform X1 [Nelumbo nucifera]
9 Hb_032202_090 0.0945230474 - - PREDICTED: ubiquitin-related modifier 1 homolog 2 [Jatropha curcas]
10 Hb_003874_020 0.0947481893 - - hypothetical protein POPTR_0012s02280g [Populus trichocarpa]
11 Hb_001369_660 0.0949109104 - - hypothetical protein B456_001G174200, partial [Gossypium raimondii]
12 Hb_001604_080 0.0965155717 - - PREDICTED: uncharacterized protein LOC105638437 [Jatropha curcas]
13 Hb_004297_070 0.0977435066 - - hypothetical protein POPTR_0009s14820g [Populus trichocarpa]
14 Hb_002289_120 0.0978768028 - - PREDICTED: uncharacterized protein LOC105645218 isoform X2 [Jatropha curcas]
15 Hb_002105_090 0.0987875691 - - Rab4 [Hevea brasiliensis]
16 Hb_001269_320 0.1005618799 - - 40S ribosomal protein S12A [Hevea brasiliensis]
17 Hb_004502_020 0.101317702 - - PREDICTED: DNA-directed RNA polymerase II subunit 4 [Jatropha curcas]
18 Hb_000771_100 0.1048431133 - - Os06g0527300 [Oryza sativa Japonica Group]
19 Hb_128048_010 0.1055424184 - - small nuclear ribonucleoprotein U)1a,U)2b, putative [Ricinus communis]
20 Hb_116420_030 0.1057162155 - - hypothetical protein POPTR_0007s14760g [Populus trichocarpa]

Gene co-expression network

sample Hb_007432_080 Hb_007432_080 Hb_000163_160 Hb_000163_160 Hb_007432_080--Hb_000163_160 Hb_010180_020 Hb_010180_020 Hb_007432_080--Hb_010180_020 Hb_001279_310 Hb_001279_310 Hb_007432_080--Hb_001279_310 Hb_001279_070 Hb_001279_070 Hb_007432_080--Hb_001279_070 Hb_004306_020 Hb_004306_020 Hb_007432_080--Hb_004306_020 Hb_168054_010 Hb_168054_010 Hb_007432_080--Hb_168054_010 Hb_010407_040 Hb_010407_040 Hb_000163_160--Hb_010407_040 Hb_001369_660 Hb_001369_660 Hb_000163_160--Hb_001369_660 Hb_000494_020 Hb_000494_020 Hb_000163_160--Hb_000494_020 Hb_004800_230 Hb_004800_230 Hb_000163_160--Hb_004800_230 Hb_002105_090 Hb_002105_090 Hb_000163_160--Hb_002105_090 Hb_000000_160 Hb_000000_160 Hb_000163_160--Hb_000000_160 Hb_001604_080 Hb_001604_080 Hb_010180_020--Hb_001604_080 Hb_004545_060 Hb_004545_060 Hb_010180_020--Hb_004545_060 Hb_010180_020--Hb_004306_020 Hb_002411_170 Hb_002411_170 Hb_010180_020--Hb_002411_170 Hb_000024_080 Hb_000024_080 Hb_010180_020--Hb_000024_080 Hb_000815_040 Hb_000815_040 Hb_010180_020--Hb_000815_040 Hb_165132_010 Hb_165132_010 Hb_001279_310--Hb_165132_010 Hb_134949_020 Hb_134949_020 Hb_001279_310--Hb_134949_020 Hb_001328_040 Hb_001328_040 Hb_001279_310--Hb_001328_040 Hb_001279_310--Hb_010407_040 Hb_001279_310--Hb_168054_010 Hb_001279_310--Hb_000163_160 Hb_003874_020 Hb_003874_020 Hb_001279_070--Hb_003874_020 Hb_032202_090 Hb_032202_090 Hb_001279_070--Hb_032202_090 Hb_009767_120 Hb_009767_120 Hb_001279_070--Hb_009767_120 Hb_000365_380 Hb_000365_380 Hb_001279_070--Hb_000365_380 Hb_002893_060 Hb_002893_060 Hb_001279_070--Hb_002893_060 Hb_010180_010 Hb_010180_010 Hb_004306_020--Hb_010180_010 Hb_004306_020--Hb_004545_060 Hb_002207_110 Hb_002207_110 Hb_004306_020--Hb_002207_110 Hb_004306_020--Hb_000024_080 Hb_005686_060 Hb_005686_060 Hb_004306_020--Hb_005686_060 Hb_168054_010--Hb_010180_020 Hb_168054_010--Hb_001369_660 Hb_001314_100 Hb_001314_100 Hb_168054_010--Hb_001314_100 Hb_168054_010--Hb_001604_080 Hb_003687_110 Hb_003687_110 Hb_168054_010--Hb_003687_110 Hb_168054_010--Hb_165132_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
4.86303 0.906104 2.64992 3.6081 3.11263 6.85581
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
6.90722 8.19282 3.15839 1.73366 0.644476

CAGE analysis