Hb_007441_360

Information

Type -
Description -
Location Contig7441: 226377-227345
Sequence    

Annotation

kegg
ID pop:POPTR_0002s13640g
description POPTRDRAFT_755053; hypothetical protein
nr
ID XP_012083763.1
description PREDICTED: uncharacterized protein LOC105643270 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067JY61
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_14682 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_007441_360 0.0 - - PREDICTED: uncharacterized protein LOC105643270 [Jatropha curcas]
2 Hb_001269_240 0.1014527207 - - aquaporin NIP6.1 family protein [Populus trichocarpa]
3 Hb_010174_200 0.1015129983 - - PREDICTED: uncharacterized protein LOC105644743 isoform X1 [Jatropha curcas]
4 Hb_003581_050 0.1044464257 transcription factor TF Family: HB PREDICTED: homeobox-leucine zipper protein ATHB-54 [Jatropha curcas]
5 Hb_000574_230 0.1132505659 - - PREDICTED: leucine-rich repeat receptor protein kinase EXS-like isoform X2 [Vitis vinifera]
6 Hb_002097_130 0.1216453857 - - tonoplast intrinsic protein [Hevea brasiliensis]
7 Hb_007257_070 0.1219685755 - - PREDICTED: uncharacterized protein LOC105638098 [Jatropha curcas]
8 Hb_026050_010 0.1223817496 - - protein phosphatase 2c, putative [Ricinus communis]
9 Hb_173107_020 0.124041416 - - PREDICTED: putative receptor-like protein kinase At1g80870 [Jatropha curcas]
10 Hb_003435_040 0.1249766157 - - tonoplast intrinsic protein [Hevea brasiliensis]
11 Hb_028928_020 0.1255716009 - - hypothetical protein CICLE_v10018504mg [Citrus clementina]
12 Hb_024650_010 0.1262935908 - - PREDICTED: BAHD acyltransferase DCR [Jatropha curcas]
13 Hb_012539_100 0.1265032896 - - PREDICTED: putative proline-rich receptor-like protein kinase PERK11 [Jatropha curcas]
14 Hb_000434_060 0.1280787397 desease resistance Gene Name: hmm Disease resistance protein RPM1, putative [Ricinus communis]
15 Hb_002725_080 0.1283310504 - - protein phosphatase 2c, putative [Ricinus communis]
16 Hb_000270_750 0.1305284528 - - PREDICTED: RING-H2 finger protein ATL46-like [Populus euphratica]
17 Hb_000892_030 0.1328452781 - - PREDICTED: uncharacterized protein At1g04910 [Jatropha curcas]
18 Hb_002518_220 0.1329924575 - - PREDICTED: uncharacterized protein LOC105631001 isoform X2 [Jatropha curcas]
19 Hb_009771_040 0.1354499642 - - hypothetical protein JCGZ_25039 [Jatropha curcas]
20 Hb_007221_040 0.1356043399 - - PREDICTED: probable receptor-like protein kinase At5g24010 isoform X2 [Populus euphratica]

Gene co-expression network

sample Hb_007441_360 Hb_007441_360 Hb_001269_240 Hb_001269_240 Hb_007441_360--Hb_001269_240 Hb_010174_200 Hb_010174_200 Hb_007441_360--Hb_010174_200 Hb_003581_050 Hb_003581_050 Hb_007441_360--Hb_003581_050 Hb_000574_230 Hb_000574_230 Hb_007441_360--Hb_000574_230 Hb_002097_130 Hb_002097_130 Hb_007441_360--Hb_002097_130 Hb_007257_070 Hb_007257_070 Hb_007441_360--Hb_007257_070 Hb_001269_240--Hb_007257_070 Hb_001269_240--Hb_000574_230 Hb_026050_010 Hb_026050_010 Hb_001269_240--Hb_026050_010 Hb_009557_080 Hb_009557_080 Hb_001269_240--Hb_009557_080 Hb_005074_010 Hb_005074_010 Hb_001269_240--Hb_005074_010 Hb_010174_200--Hb_026050_010 Hb_081864_010 Hb_081864_010 Hb_010174_200--Hb_081864_010 Hb_173107_020 Hb_173107_020 Hb_010174_200--Hb_173107_020 Hb_114733_010 Hb_114733_010 Hb_010174_200--Hb_114733_010 Hb_009771_040 Hb_009771_040 Hb_010174_200--Hb_009771_040 Hb_003266_090 Hb_003266_090 Hb_003581_050--Hb_003266_090 Hb_007221_040 Hb_007221_040 Hb_003581_050--Hb_007221_040 Hb_002518_220 Hb_002518_220 Hb_003581_050--Hb_002518_220 Hb_003581_050--Hb_010174_200 Hb_003581_050--Hb_007257_070 Hb_000574_230--Hb_007257_070 Hb_000574_230--Hb_026050_010 Hb_002725_080 Hb_002725_080 Hb_000574_230--Hb_002725_080 Hb_024650_010 Hb_024650_010 Hb_000574_230--Hb_024650_010 Hb_000574_230--Hb_007221_040 Hb_028928_020 Hb_028928_020 Hb_002097_130--Hb_028928_020 Hb_033187_020 Hb_033187_020 Hb_002097_130--Hb_033187_020 Hb_000589_330 Hb_000589_330 Hb_002097_130--Hb_000589_330 Hb_003849_200 Hb_003849_200 Hb_002097_130--Hb_003849_200 Hb_003435_040 Hb_003435_040 Hb_002097_130--Hb_003435_040 Hb_001013_050 Hb_001013_050 Hb_002097_130--Hb_001013_050 Hb_007257_070--Hb_026050_010 Hb_007257_070--Hb_005074_010 Hb_007257_070--Hb_028928_020 Hb_003071_050 Hb_003071_050 Hb_007257_070--Hb_003071_050
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.166789 33.0018 22.9571 42.3575 1.54995 0.168978
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.210845 0.124368 0.380718 4.22115 21.9993

CAGE analysis