Hb_007483_120

Information

Type -
Description -
Location Contig7483: 66963-68204
Sequence    

Annotation

kegg
ID tcc:TCM_029566
description Ribosomal protein L32e isoform 1
nr
ID ADR71279.1
description 60S ribosomal protein L32A [Hevea brasiliensis]
swissprot
ID P49211
description 60S ribosomal protein L32-1 OS=Arabidopsis thaliana GN=RPL32A PE=2 SV=2
trembl
ID I3NMP3
description 60S ribosomal protein L32A OS=Hevea brasiliensis GN=RPL32B PE=2 SV=1
Gene Ontology
ID GO:0005840
description 60s ribosomal protein l32-1-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_007483_120 0.0 - - 60S ribosomal protein L32A [Hevea brasiliensis]
2 Hb_012308_050 0.081404985 transcription factor TF Family: AUX/IAA PREDICTED: auxin-responsive protein IAA9-like [Jatropha curcas]
3 Hb_005724_040 0.1018295238 - - hypothetical protein JCGZ_13142 [Jatropha curcas]
4 Hb_000181_230 0.1029870336 - - copper ion binding protein, putative [Ricinus communis]
5 Hb_002510_100 0.1297721783 - - Root phototropism protein, putative [Ricinus communis]
6 Hb_002685_160 0.1313813563 - - leucine-rich repeat protein, putative [Ricinus communis]
7 Hb_000685_020 0.1370718062 - - PREDICTED: long chain acyl-CoA synthetase 4-like [Jatropha curcas]
8 Hb_000654_050 0.1386116073 - - hypothetical protein POPTR_0005s07810g [Populus trichocarpa]
9 Hb_002849_180 0.1406371017 - - PREDICTED: calmodulin-binding receptor-like cytoplasmic kinase 2 [Jatropha curcas]
10 Hb_000482_120 0.1421419872 - - PREDICTED: uncharacterized protein LOC105638146 [Jatropha curcas]
11 Hb_003029_120 0.146203248 - - PREDICTED: uncharacterized protein LOC105642638 [Jatropha curcas]
12 Hb_002539_050 0.1464933915 - - PREDICTED: PLASMODESMATA CALLOSE-BINDING PROTEIN 3 [Jatropha curcas]
13 Hb_002740_100 0.1514645097 - - Rhicadhesin receptor precursor, putative [Ricinus communis]
14 Hb_002099_060 0.1576900851 - - Protein AFR, putative [Ricinus communis]
15 Hb_000071_160 0.1600515686 - - PREDICTED: protein IQ-DOMAIN 14 [Jatropha curcas]
16 Hb_000230_360 0.1606499801 - - PREDICTED: BI1-like protein [Jatropha curcas]
17 Hb_000320_270 0.1613588664 - - PREDICTED: 5'-adenylylsulfate reductase 1, chloroplastic [Jatropha curcas]
18 Hb_000061_310 0.1614841793 - - PREDICTED: probable serine/threonine-protein kinase At1g54610 isoform X1 [Jatropha curcas]
19 Hb_000453_020 0.1632366605 - - Protein kinase APK1B, chloroplast precursor, putative [Ricinus communis]
20 Hb_006185_040 0.1634668134 - - PREDICTED: verprolin [Jatropha curcas]

Gene co-expression network

sample Hb_007483_120 Hb_007483_120 Hb_012308_050 Hb_012308_050 Hb_007483_120--Hb_012308_050 Hb_005724_040 Hb_005724_040 Hb_007483_120--Hb_005724_040 Hb_000181_230 Hb_000181_230 Hb_007483_120--Hb_000181_230 Hb_002510_100 Hb_002510_100 Hb_007483_120--Hb_002510_100 Hb_002685_160 Hb_002685_160 Hb_007483_120--Hb_002685_160 Hb_000685_020 Hb_000685_020 Hb_007483_120--Hb_000685_020 Hb_012308_050--Hb_002510_100 Hb_000654_050 Hb_000654_050 Hb_012308_050--Hb_000654_050 Hb_002849_180 Hb_002849_180 Hb_012308_050--Hb_002849_180 Hb_012308_050--Hb_005724_040 Hb_000320_270 Hb_000320_270 Hb_012308_050--Hb_000320_270 Hb_005724_040--Hb_000181_230 Hb_002740_100 Hb_002740_100 Hb_005724_040--Hb_002740_100 Hb_001221_390 Hb_001221_390 Hb_005724_040--Hb_001221_390 Hb_002099_060 Hb_002099_060 Hb_005724_040--Hb_002099_060 Hb_005724_040--Hb_002685_160 Hb_000181_230--Hb_002740_100 Hb_000181_230--Hb_002099_060 Hb_002344_080 Hb_002344_080 Hb_000181_230--Hb_002344_080 Hb_000181_230--Hb_002685_160 Hb_000613_250 Hb_000613_250 Hb_002510_100--Hb_000613_250 Hb_001013_050 Hb_001013_050 Hb_002510_100--Hb_001013_050 Hb_003849_200 Hb_003849_200 Hb_002510_100--Hb_003849_200 Hb_001048_070 Hb_001048_070 Hb_002510_100--Hb_001048_070 Hb_002685_160--Hb_000685_020 Hb_000230_360 Hb_000230_360 Hb_002685_160--Hb_000230_360 Hb_152980_020 Hb_152980_020 Hb_002685_160--Hb_152980_020 Hb_003656_090 Hb_003656_090 Hb_002685_160--Hb_003656_090 Hb_002097_080 Hb_002097_080 Hb_002685_160--Hb_002097_080 Hb_136033_010 Hb_136033_010 Hb_000685_020--Hb_136033_010 Hb_139461_010 Hb_139461_010 Hb_000685_020--Hb_139461_010 Hb_000685_020--Hb_152980_020 Hb_000120_320 Hb_000120_320 Hb_000685_020--Hb_000120_320
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0186841 0.142922 0.156673 0.25337 0.0187344 0.0328556
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.0807929 0.138679

CAGE analysis